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  5. Solyc10g009020.3.1

Solyc10g009020.3.1 (Solyc10g009020)


Aliases : Solyc10g009020

Description : RING-HC-class E3 ligase


Gene families : OG0001060 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001060_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc10g009020.3.1

Target Alias Description ECC score Gene Family Method Actions
AT5G01520 No alias RING/U-box superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G58787 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
Aop_g02075 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g17096 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.19G061700.1 Ceric.19G061700 E3 ubiquitin ligase & original description:... 0.03 OrthoFinder output from all 47 species
Gb_28378 No alias RING-HC-class E3 ligase 0.03 OrthoFinder output from all 47 species
LOC_Os01g67850.1 LOC_Os01g67850 RING-HC-class E3 ligase 0.03 OrthoFinder output from all 47 species
LOC_Os04g58320.2 LOC_Os04g58320 RING-HC-class E3 ligase 0.03 OrthoFinder output from all 47 species
Ppi_g11231 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g30948 No alias E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e004460_P001 Zm00001e004460 RING-HC-class E3 ligase 0.03 OrthoFinder output from all 47 species
Zm00001e018924_P001 Zm00001e018924 RING-HC-class E3 ligase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA

No InterPro domains available for this sequence

No external refs found!