Solyc10g008270.3.1 (Solyc10g008270)


Aliases : Solyc10g008270

Description : no hits & (original description: none)


Gene families : OG0002401 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002401_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc10g008270.3.1
Cluster HCCA: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
AT1G62975 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 OrthoFinder output from all 47 species
MA_10290037g0010 No alias transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
MA_119324g0010 BHLH101 transcription factor (bHLH). iron/copper homeostasis... 0.02 OrthoFinder output from all 47 species
MA_384190g0010 No alias transcription factor (bHLH) 0.05 OrthoFinder output from all 47 species
MA_8008760g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e017129_P001 Zm00001e017129 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 15 65
No external refs found!