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  5. Solyc10g008140.3.1

Solyc10g008140.3.1 (PHB1, ATPHB1, Solyc10g008140)


Aliases : PHB1, ATPHB1, Solyc10g008140

Description : Prohibitin-2, mitochondrial OS=Arabidopsis thaliana (sp|q9znt7|phb2_arath : 428.0)


Gene families : OG0002789 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002789_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc10g008140.3.1
Cluster HCCA: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00058p00112040 PHB1, ATPHB1,... Prohibitin-1, mitochondrial OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
AMTR_s00071p00140730 PHB1, ATPHB1,... Prohibitin-1, mitochondrial OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
AT1G03860 PHB2, ATPHB2 prohibitin 2 0.02 OrthoFinder output from all 47 species
AT4G28510 PHB1, ATPHB1 prohibitin 1 0.03 OrthoFinder output from all 47 species
Adi_g023316 PHB1, ATPHB1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g00787 PHB1, ATPHB1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g01193 PHB1, ATPHB1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g00373 PHB1, ATPHB1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Azfi_s0003.g007878 PHB1, ATPHB1 not classified & original description: CDS=220-1083 0.04 OrthoFinder output from all 47 species
Ceric.02G011500.1 PHB1, ATPHB1,... not classified & original description: pacid=50584039... 0.08 OrthoFinder output from all 47 species
Cre02.g088000 PHB1, ATPHB1 Prohibitin-1, mitochondrial OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Dac_g03655 PHB1, ATPHB1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g15221 PHB1, ATPHB1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01027465001 PHB1, ATPHB1 Prohibitin-1, mitochondrial OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01036736001 PHB1, ATPHB1 Prohibitin-1, mitochondrial OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Gb_24064 PHB1, ATPHB1 Prohibitin-1, mitochondrial OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
LOC_Os03g62490.1 PHB1, ATPHB1,... Prohibitin-2, mitochondrial OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
LOC_Os07g15880.1 PHB2, ATPHB2,... Prohibitin-2, mitochondrial OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
Len_g48441 PHB1, ATPHB1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g03771 PHB1, ATPHB1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_9438062g0010 PHB1, ATPHB1 Prohibitin-1, mitochondrial OS=Arabidopsis thaliana... 0.12 OrthoFinder output from all 47 species
Mp1g10410.1 PHB1, ATPHB1 Prohibitin-2, mitochondrial OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Msp_g01082 PHB1, ATPHB1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g29084 PHB1, ATPHB1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12045 PHB1, ATPHB1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g12642 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g28993 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo444067 PHB1, ATPHB1 Prohibitin-2, mitochondrial OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Spa_g21133 PHB1, ATPHB1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g25323 PHB1, ATPHB1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g00443 PHB1, ATPHB1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e009600_P001 PHB2, ATPHB2,... Prohibitin-2, mitochondrial OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003697 single-stranded DNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001107 Band_7 40 216
No external refs found!