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  5. Solyc10g008020.3.1

Solyc10g008020.3.1 (Solyc10g008020)


Aliases : Solyc10g008020

Description : no hits & (original description: none)


Gene families : OG0003097 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003097_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc10g008020.3.1
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
Aev_g04608 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g05622 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g04010 G-TMT, VTE4, TMT1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0031.g024465 No alias not classified & original description: CDS=109-1320 0.03 OrthoFinder output from all 47 species
Ceric.06G059400.1 Ceric.06G059400 not classified & original description: pacid=50619230... 0.06 OrthoFinder output from all 47 species
Ceric.15G001900.1 Ceric.15G001900 not classified & original description: pacid=50639670... 0.09 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021127.14 No alias No description available 0.02 OrthoFinder output from all 47 species
Cre06.g259401 No alias No description available 0.07 OrthoFinder output from all 47 species
Dcu_g50125 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dde_g06609 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g07671 G-TMT, VTE4, TMT1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01020686001 G-TMT, VTE4, TMT1 No description available 0.04 OrthoFinder output from all 47 species
LOC_Os10g10180.1 G-TMT, VTE4,... no hits & (original description: none) 0.15 OrthoFinder output from all 47 species
MA_10430392g0010 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Msp_g01531 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g19529 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g17437 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g000952 No alias not classified & original description: CDS=390-1673 0.04 OrthoFinder output from all 47 species
Sam_g14377 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo90177 No alias No description available 0.02 OrthoFinder output from all 47 species
Spa_g11724 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g30454 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e012884_P003 G-TMT, VTE4,... no hits & (original description: none) 0.13 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008168 methyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
InterPro domains Description Start Stop
IPR013216 Methyltransf_11 213 315
No external refs found!