1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc10g007820.3.1

Solyc10g007820.3.1 (HVA22F, Solyc10g007820)


Aliases : HVA22F, Solyc10g007820

Description : HVA22-like protein f OS=Arabidopsis thaliana (sp|q682h0|ha22f_arath : 219.0)


Gene families : OG0000842 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000842_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc10g007820.3.1
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00253210 HVA22F,... HVA22-like protein f OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
AT2G42820 HVA22F HVA22-like protein F 0.13 OrthoFinder output from all 47 species
AT5G62490 ATHVA22B, HVA22B HVA22 homologue B 0.03 OrthoFinder output from all 47 species
Aop_g10178 ATHVA22A, HVA22A not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.08G053300.1 HVA22F, Ceric.08G053300 not classified & original description: pacid=50637741... 0.03 OrthoFinder output from all 47 species
Ceric.13G028300.1 HVA22F, Ceric.13G028300 not classified & original description: pacid=50636869... 0.04 OrthoFinder output from all 47 species
Ceric.22G008400.1 HVA22F, Ceric.22G008400 not classified & original description: pacid=50614345... 0.03 OrthoFinder output from all 47 species
GSVIVT01000808001 HVA22F HVA22-like protein f OS=Arabidopsis thaliana 0.15 OrthoFinder output from all 47 species
GSVIVT01008026001 ATHVA22A, HVA22A HVA22-like protein a OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01008576001 HVA22E, ATHVA22E HVA22-like protein e OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Gb_16303 HVA22F HVA22-like protein f OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_113124g0010 HVA22F HVA22-like protein f OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
MA_62010g0010 HVA22F HVA22-like protein f OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Mp3g15420.1 HVA22E, ATHVA22E HVA22-like protein f OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Msp_g37973 HVA22F not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g10087 HVA22F not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g01169 HVA22F not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g04158 HVA22F not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g50646 HVA22F not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo417586 No alias No description available 0.03 OrthoFinder output from all 47 species
Tin_g25027 HVA22F not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e009930_P001 HVA22D,... Protein HVA22 OS=Hordeum vulgare (sp|q07764|hva22_horvu : 161.0) 0.04 OrthoFinder output from all 47 species
Zm00001e011109_P001 HVA22E,... Protein HVA22 OS=Hordeum vulgare (sp|q07764|hva22_horvu : 168.0) 0.02 OrthoFinder output from all 47 species
Zm00001e028216_P002 HVA22F, Zm00001e028216 HVA22-like protein f OS=Arabidopsis thaliana... 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004602 glutathione peroxidase activity IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA
InterPro domains Description Start Stop
IPR004345 TB2_DP1_HVA22 24 99
No external refs found!