- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : Solyc10g007660
Description : CASP-like protein 2A1 OS=Vitis vinifera (sp|a7qbz2|cspla_vitvi : 238.0)
Gene families : OG0000811 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000811_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Solyc10g007660.3.1 | |
| Cluster | HCCA: Cluster_107 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00131p00032340 | evm_27.TU.AmTr_v1... | CASP-like protein 2A1 OS=Oryza sativa subsp. japonica | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g005547 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g031098 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g115376 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g45174 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g11429 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os04g21320.1 | LOC_Os04g21320 | CASP-like protein 2A1 OS=Oryza sativa subsp. indica... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os06g44610.1 | LOC_Os06g44610 | CASP-like protein 2C1 OS=Oryza sativa subsp. japonica... | 0.02 | OrthoFinder output from all 47 species | |
| Mp5g15430.1 | No alias | CASP-like protein 2U1 OS=Marchantia polymorpha... | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g39866 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g41718 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g02059 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e013801_P001 | Zm00001e013801 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005576 | extracellular region | IEP | HCCA |
| CC | GO:0005618 | cell wall | IEP | HCCA |
| BP | GO:0006073 | cellular glucan metabolic process | IEP | HCCA |
| MF | GO:0016620 | oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | IEP | HCCA |
| MF | GO:0016762 | xyloglucan:xyloglucosyl transferase activity | IEP | HCCA |
| MF | GO:0016903 | oxidoreductase activity, acting on the aldehyde or oxo group of donors | IEP | HCCA |
| CC | GO:0030312 | external encapsulating structure | IEP | HCCA |
| BP | GO:0044042 | glucan metabolic process | IEP | HCCA |
| BP | GO:0044264 | cellular polysaccharide metabolic process | IEP | HCCA |
| MF | GO:0045735 | nutrient reservoir activity | IEP | HCCA |
| CC | GO:0048046 | apoplast | IEP | HCCA |
| MF | GO:0051536 | iron-sulfur cluster binding | IEP | HCCA |
| MF | GO:0051540 | metal cluster binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR006702 | CASP_dom | 18 | 155 |
| No external refs found! |