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Aliases : Solyc10g006070
Description : component RPS8 of SSU proteome
Gene families : OG0000906 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000906_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00055p00155570 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.13 | OrthoFinder output from all 47 species | |
| AMTR_s00109p00031400 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.16 | OrthoFinder output from all 47 species | |
| AT5G20290 | No alias | Ribosomal protein S8e family protein | 0.19 | OrthoFinder output from all 47 species | |
| Adi_g113421 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g114367 | No alias | component *(eS8) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g10713 | No alias | component *(eS8) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g00910 | No alias | component *(eS8) of small ribosomal-subunit (SSU)... | 0.08 | OrthoFinder output from all 47 species | |
| Ala_g34365 | No alias | component *(eS8) of small ribosomal-subunit (SSU)... | 0.08 | OrthoFinder output from all 47 species | |
| Ala_g38098 | No alias | component *(eS8) of small ribosomal-subunit (SSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Als_g28264 | No alias | component *(eS8) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Als_g42521 | No alias | component *(eS8) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Als_g62935 | No alias | component *(eS8) of small ribosomal-subunit (SSU)... | 0.06 | OrthoFinder output from all 47 species | |
| Aob_g07667 | No alias | component *(eS8) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g11567 | No alias | component *(eS8) of small ribosomal-subunit (SSU)... | 0.1 | OrthoFinder output from all 47 species | |
| Aop_g23945 | No alias | component *(eS8) of small ribosomal-subunit (SSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g32909 | No alias | component *(eS8) of small ribosomal-subunit (SSU)... | 0.12 | OrthoFinder output from all 47 species | |
| Cba_g19773 | No alias | component *(eS8) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g36871 | No alias | component *(eS8) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g69923 | No alias | component *(eS8) of small ribosomal-subunit (SSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.01G124400.1 | Ceric.01G124400 | component *(eS8) of small ribosomal-subunit (SSU)... | 0.13 | OrthoFinder output from all 47 species | |
| Ceric.12G096700.1 | Ceric.12G096700 | component *(eS8) of small ribosomal-subunit (SSU)... | 0.13 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00020610.79 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.09 | OrthoFinder output from all 47 species | |
| Cre06.g272800 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.13 | OrthoFinder output from all 47 species | |
| Dac_g03069 | No alias | component *(eS8) of small ribosomal-subunit (SSU)... | 0.09 | OrthoFinder output from all 47 species | |
| Dac_g14336 | No alias | component *(eS8) of small ribosomal-subunit (SSU)... | 0.07 | OrthoFinder output from all 47 species | |
| Dcu_g03556 | No alias | component *(eS8) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g29644 | No alias | component *(eS8) of small ribosomal-subunit (SSU)... | 0.09 | OrthoFinder output from all 47 species | |
| Dde_g18448 | No alias | component *(eS8) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g21450 | No alias | component *(eS8) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g46750 | No alias | component *(eS8) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01006249001 | No alias | 40S ribosomal protein S8 OS=Zea mays | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01031566001 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.15 | OrthoFinder output from all 47 species | |
| GSVIVT01037763001 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.11 | OrthoFinder output from all 47 species | |
| Gb_28325 | No alias | component RPS8 of SSU proteome | 0.14 | OrthoFinder output from all 47 species | |
| LOC_Os02g28810.1 | LOC_Os02g28810 | 40S ribosomal protein S8 OS=Oryza sativa subsp. japonica... | 0.11 | OrthoFinder output from all 47 species | |
| LOC_Os04g28180.1 | LOC_Os04g28180 | component RPS8 of SSU proteome | 0.12 | OrthoFinder output from all 47 species | |
| Lfl_g05239 | No alias | component *(eS8) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g11961 | No alias | component *(eS8) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
| MA_10436736g0010 | No alias | 40S ribosomal protein S8 OS=Oryza sativa subsp. japonica... | 0.04 | OrthoFinder output from all 47 species | |
| MA_14571g0010 | No alias | component RPS8 of SSU proteome | 0.11 | OrthoFinder output from all 47 species | |
| MA_4907g0010 | No alias | 40S ribosomal protein S8 OS=Prunus armeniaca... | 0.05 | OrthoFinder output from all 47 species | |
| MA_9738483g0010 | No alias | component RPS8 of SSU proteome | 0.06 | OrthoFinder output from all 47 species | |
| Mp2g16300.1 | No alias | component RPS8 of SSU proteome | 0.18 | OrthoFinder output from all 47 species | |
| Msp_g01868 | No alias | component *(eS8) of small ribosomal-subunit (SSU)... | 0.1 | OrthoFinder output from all 47 species | |
| Msp_g18199 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Nbi_g01823 | No alias | component *(eS8) of small ribosomal-subunit (SSU)... | 0.09 | OrthoFinder output from all 47 species | |
| Ore_g02405 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g02421 | No alias | component *(eS8) of small ribosomal-subunit (SSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Pir_g03002 | No alias | component *(eS8) of small ribosomal-subunit (SSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Pir_g03638 | No alias | component *(eS8) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g55370 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pp3c12_18260V3.1 | Pp3c12_18260 | Ribosomal protein S8e family protein | 0.02 | OrthoFinder output from all 47 species | |
| Pp3c13_20020V3.1 | Pp3c13_20020 | Ribosomal protein S8e family protein | 0.11 | OrthoFinder output from all 47 species | |
| Pp3c19_6490V3.1 | Pp3c19_6490 | Ribosomal protein S8e family protein | 0.09 | OrthoFinder output from all 47 species | |
| Pp3c4_11370V3.1 | Pp3c4_11370 | Ribosomal protein S8e family protein | 0.08 | OrthoFinder output from all 47 species | |
| Ppi_g14976 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g16148 | No alias | component *(eS8) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g23733 | No alias | component *(eS8) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g25083 | No alias | component *(eS8) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0022.g008597 | No alias | component *(eS8) of small ribosomal-subunit (SSU)... | 0.08 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0161.g023905 | No alias | component *(eS8) of small ribosomal-subunit (SSU)... | 0.09 | OrthoFinder output from all 47 species | |
| Sam_g06814 | No alias | component *(eS8) of small ribosomal-subunit (SSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Sam_g15855 | No alias | component *(eS8) of small ribosomal-subunit (SSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g19629 | No alias | component *(eS8) of small ribosomal-subunit (SSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Sam_g27314 | No alias | component *(eS8) of small ribosomal-subunit (SSU)... | 0.06 | OrthoFinder output from all 47 species | |
| Spa_g11102 | No alias | component *(eS8) of small ribosomal-subunit (SSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g21054 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Spa_g25236 | No alias | component *(eS8) of small ribosomal-subunit (SSU)... | 0.08 | OrthoFinder output from all 47 species | |
| Spa_g44564 | No alias | component *(eS8) of small ribosomal-subunit (SSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g47973 | No alias | component *(eS8) of small ribosomal-subunit (SSU)... | 0.07 | OrthoFinder output from all 47 species | |
| Spa_g53727 | No alias | component *(eS8) of small ribosomal-subunit (SSU)... | 0.11 | OrthoFinder output from all 47 species | |
| Spa_g53728 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g03723 | No alias | component *(eS8) of small ribosomal-subunit (SSU)... | 0.11 | OrthoFinder output from all 47 species | |
| Tin_g09569 | No alias | component *(eS8) of small ribosomal-subunit (SSU)... | 0.08 | OrthoFinder output from all 47 species | |
| Tin_g45585 | No alias | component *(eS8) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e004092_P002 | Zm00001e004092 | component RPS8 of SSU proteome | 0.12 | OrthoFinder output from all 47 species | |
| Zm00001e024994_P001 | Zm00001e024994 | component RPS8 of SSU proteome | 0.07 | OrthoFinder output from all 47 species | |
| Zm00001e024995_P001 | Zm00001e024995 | component RPS8 of SSU proteome | 0.13 | OrthoFinder output from all 47 species | |
| Zm00001e024996_P001 | Zm00001e024996 | component RPS8 of SSU proteome | 0.1 | OrthoFinder output from all 47 species | |
| Zm00001e024999_P001 | Zm00001e024999 | component RPS8 of SSU proteome | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
| MF | GO:0005198 | structural molecule activity | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005840 | ribosome | IEP | HCCA |
| BP | GO:0006412 | translation | IEP | HCCA |
| BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
| BP | GO:0043603 | amide metabolic process | IEP | HCCA |
| BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR022309 | Ribosomal_S8e/biogenesis_NSA2 | 1 | 196 |
| No external refs found! |