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  5. Solyc10g006020.3.1

Solyc10g006020.3.1 (emb1860, TIM50, Solyc10g006020)


Aliases : emb1860, TIM50, Solyc10g006020

Description : subcluster G phosphatase. component Tim50 of inner mitochondrion membrane TIM translocation system


Gene families : OG0004850 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004850_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc10g006020.3.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g007249 emb1860, TIM50 component *(Tim50) of inner mitochondrion membrane TIM... 0.03 OrthoFinder output from all 47 species
Als_g21868 emb1860, TIM50 component *(Tim50) of inner mitochondrion membrane TIM... 0.02 OrthoFinder output from all 47 species
Cre12.g505950 emb1860, TIM50 Protein translocation.mitochondrion.inner mitochondrion... 0.03 OrthoFinder output from all 47 species
Dac_g31453 emb1860, TIM50 component *(Tim50) of inner mitochondrion membrane TIM... 0.03 OrthoFinder output from all 47 species
Dcu_g01011 emb1860, TIM50 component *(Tim50) of inner mitochondrion membrane TIM... 0.04 OrthoFinder output from all 47 species
GSVIVT01030074001 emb1860, TIM50 Protein translocation.mitochondrion.inner mitochondrion... 0.07 OrthoFinder output from all 47 species
Gb_40091 emb1860, TIM50 subcluster G phosphatase. component Tim50 of inner... 0.03 OrthoFinder output from all 47 species
LOC_Os01g55700.1 emb1860, TIM50,... subcluster G phosphatase. component Tim50 of inner... 0.09 OrthoFinder output from all 47 species
MA_124841g0010 emb1860, TIM50 subcluster G phosphatase. component Tim50 of inner... 0.02 OrthoFinder output from all 47 species
Ore_g19230 emb1860, TIM50 component *(Tim50) of inner mitochondrion membrane TIM... 0.03 OrthoFinder output from all 47 species
Zm00001e029006_P001 emb1860, TIM50,... subcluster G phosphatase. component Tim50 of inner... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP HCCA
MF GO:0005047 signal recognition particle binding IEP HCCA
MF GO:0005048 signal sequence binding IEP HCCA
CC GO:0005786 signal recognition particle, endoplasmic reticulum targeting IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006613 cotranslational protein targeting to membrane IEP HCCA
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
MF GO:0008312 7S RNA binding IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0030942 endoplasmic reticulum signal peptide binding IEP HCCA
MF GO:0033218 amide binding IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
MF GO:0042277 peptide binding IEP HCCA
MF GO:0042802 identical protein binding IEP HCCA
MF GO:0042803 protein homodimerization activity IEP HCCA
MF GO:0043021 ribonucleoprotein complex binding IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
BP GO:0045047 protein targeting to ER IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
CC GO:0048500 signal recognition particle IEP HCCA
MF GO:0051087 chaperone binding IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
MF GO:0060590 ATPase regulator activity IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0070972 protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR004274 FCP1_dom 175 320
No external refs found!