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  5. Solyc10g005610.2.1

Solyc10g005610.2.1 (Solyc10g005610)


Aliases : Solyc10g005610

Description : no hits & (original description: none)


Gene families : OG0001961 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001961_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc10g005610.2.1
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
AT1G79060 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.05 OrthoFinder output from all 47 species
Adi_g001976 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g27098 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g15808 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g40600 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g08176 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene61199.t1 Aspi01Gene61199 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g09049 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01022142001 No alias No description available 0.05 OrthoFinder output from all 47 species
Gb_13865 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os02g06960.1 LOC_Os02g06960 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os06g46250.1 LOC_Os06g46250 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os09g28520.1 LOC_Os09g28520 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Len_g59008 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp6g00820.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g03049 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g04362 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g05577 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e009954_P001 Zm00001e009954 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Zm00001e013706_P001 Zm00001e013706 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e025161_P001 Zm00001e025161 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!