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  5. Solyc10g005320.3.1

Solyc10g005320.3.1 (Solyc10g005320)


Aliases : Solyc10g005320

Description : Enzyme classification.EC_4 lyases.EC_4.2 carbon-oxygen lyase(50.4.2 : 549.0) & Tryptophan synthase beta chain 2, chloroplastic OS=Camptotheca acuminata (sp|o50046|trpb_camac : 532.0)


Gene families : OG0002978 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002978_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc10g005320.3.1

Target Alias Description ECC score Gene Family Method Actions
AT5G28237 No alias Pyridoxal-5'-phosphate-dependent enzyme family protein 0.04 OrthoFinder output from all 47 species
AT5G54810 TRP2, TSB1, ATTSB1, TRPB tryptophan synthase beta-subunit 1 0.04 OrthoFinder output from all 47 species
Aop_g69298 TSB2 EC_4.2 carbon-oxygen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene45011.t1 TRP2, TSB1,... EC_4.2 carbon-oxygen lyase & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01012644001 No alias Enzyme classification.EC_4 lyases.EC_4.2 carbon-oxygen... 0.05 OrthoFinder output from all 47 species
Ore_g04293 TRP2, TSB1, ATTSB1, TRPB EC_4.2 carbon-oxygen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g06305 TRP2, TSB1, ATTSB1, TRPB EC_4.2 carbon-oxygen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Solyc10g018390.3.1 Solyc10g018390 Enzyme classification.EC_4 lyases.EC_4.2 carbon-oxygen... 0.03 OrthoFinder output from all 47 species
Spa_g21643 TSB2 EC_4.2 carbon-oxygen lyase & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g02639 TRP2, TSB1, ATTSB1, TRPB EC_4.2 carbon-oxygen lyase & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004177 aminopeptidase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
InterPro domains Description Start Stop
IPR001926 TrpB-like_PALP 115 443
No external refs found!