Aliases : PPR336, Solyc10g005280
Description : PPR-type mitochondrial ribosome regulatory protein (PPR336)
Gene families : OG0001250 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001250_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Solyc10g005280.1.1 | |
Cluster | HCCA: Cluster_19 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00029p00106010 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At4g36680,... | 0.04 | OrthoFinder output from all 47 species | |
AMTR_s00032p00197250 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At1g55890,... | 0.04 | OrthoFinder output from all 47 species | |
AT1G55890 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.08 | OrthoFinder output from all 47 species | |
AT1G61870 | PPR336 | pentatricopeptide repeat 336 | 0.06 | OrthoFinder output from all 47 species | |
AT2G18520 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.08 | OrthoFinder output from all 47 species | |
AT3G13150 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
AT3G13160 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.11 | OrthoFinder output from all 47 species | |
AT4G36680 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.11 | OrthoFinder output from all 47 species | |
LOC_Os01g58080.1 | PPR336, LOC_Os01g58080 | PPR-type mitochondrial ribosome regulatory protein (PPR336) | 0.05 | OrthoFinder output from all 47 species | |
LOC_Os01g63400.1 | LOC_Os01g63400 | Pentatricopeptide repeat-containing protein At3g09060... | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os02g42210.1 | LOC_Os02g42210 | Pentatricopeptide repeat-containing protein At4g36680,... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os06g30420.1 | EMB1025, LOC_Os06g30420 | Pentatricopeptide repeat-containing protein At4g20090... | 0.02 | OrthoFinder output from all 47 species | |
MA_125741g0010 | No alias | Pentatricopeptide repeat-containing protein At5g16420,... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e015190_P001 | Zm00001e015190 | Pentatricopeptide repeat-containing protein At2g18520,... | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e019591_P001 | PPR336, Zm00001e019591 | PPR-type mitochondrial ribosome regulatory protein (PPR336) | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e028938_P001 | Zm00001e028938 | Pentatricopeptide repeat-containing protein At1g55890,... | 0.1 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
MF | GO:0005198 | structural molecule activity | IEP | HCCA |
CC | GO:0005840 | ribosome | IEP | HCCA |
BP | GO:0006412 | translation | IEP | HCCA |
BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
MF | GO:0008097 | 5S rRNA binding | IEP | HCCA |
BP | GO:0009058 | biosynthetic process | IEP | HCCA |
BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
MF | GO:0019843 | rRNA binding | IEP | HCCA |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
CC | GO:0043226 | organelle | IEP | HCCA |
CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
CC | GO:0043229 | intracellular organelle | IEP | HCCA |
CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
BP | GO:0043603 | amide metabolic process | IEP | HCCA |
BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
No external refs found! |