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  5. Solyc10g005200.3.1

Solyc10g005200.3.1 (Solyc10g005200)


Aliases : Solyc10g005200

Description : beta-1,4-galactosyltransferase


Gene families : OG0000987 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000987_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc10g005200.3.1
Cluster HCCA: Cluster_79

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00037p00116470 evm_27.TU.AmTr_v1... Cell wall.pectin.rhamnogalacturonan... 0.03 OrthoFinder output from all 47 species
AT2G33570 No alias Domain of unknown function (DUF23) 0.07 OrthoFinder output from all 47 species
AT5G44670 No alias Domain of unknown function (DUF23) 0.03 OrthoFinder output from all 47 species
Als_g07959 No alias beta-1,4-galactosyltransferase *(GALS) & original... 0.05 OrthoFinder output from all 47 species
Aob_g16965 No alias beta-1,4-galactosyltransferase *(GALS) & original... 0.05 OrthoFinder output from all 47 species
Aspi01Gene25840.t1 Aspi01Gene25840 beta-1,4-galactosyltransferase *(GALS) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene38324.t1 Aspi01Gene38324 beta-1,4-galactosyltransferase *(GALS) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene51366.t2 Aspi01Gene51366 beta-1,4-galactosyltransferase *(GALS) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0043.g027147 No alias beta-1,4-galactosyltransferase *(GALS) & original... 0.04 OrthoFinder output from all 47 species
Azfi_s0075.g037706 No alias beta-1,4-galactosyltransferase *(GALS) & original... 0.04 OrthoFinder output from all 47 species
Ceric.13G084100.1 Ceric.13G084100 beta-1,4-galactosyltransferase *(GALS) & original... 0.02 OrthoFinder output from all 47 species
Dcu_g46750 No alias beta-1,4-galactosyltransferase *(GALS) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g23369 No alias beta-1,4-galactosyltransferase *(GALS) & original... 0.05 OrthoFinder output from all 47 species
GSVIVT01010061001 No alias Cell wall.pectin.rhamnogalacturonan... 0.09 OrthoFinder output from all 47 species
GSVIVT01013454001 No alias Cell wall.pectin.rhamnogalacturonan... 0.11 OrthoFinder output from all 47 species
Gb_35535 No alias beta-1,4-galactosyltransferase 0.03 OrthoFinder output from all 47 species
LOC_Os06g22330.1 LOC_Os06g22330 beta-1,4-galactosyltransferase 0.04 OrthoFinder output from all 47 species
LOC_Os06g41910.1 LOC_Os06g41910 beta-1,4-galactosyltransferase 0.09 OrthoFinder output from all 47 species
MA_10433350g0010 No alias beta-1,4-galactosyltransferase 0.07 OrthoFinder output from all 47 species
MA_10433350g0020 No alias Galactan beta-1,4-galactosyltransferase GALS1... 0.07 OrthoFinder output from all 47 species
MA_99230g0010 No alias beta-1,4-galactosyltransferase 0.05 OrthoFinder output from all 47 species
Nbi_g43704 No alias beta-1,4-galactosyltransferase *(GALS) & original... 0.02 OrthoFinder output from all 47 species
Ppi_g05858 No alias beta-1,4-galactosyltransferase *(GALS) & original... 0.03 OrthoFinder output from all 47 species
Ppi_g62179 No alias beta-1,4-galactosyltransferase *(GALS) & original... 0.03 OrthoFinder output from all 47 species
Sam_g11724 No alias beta-1,4-galactosyltransferase *(GALS) & original... 0.02 OrthoFinder output from all 47 species
Zm00001e037549_P001 Zm00001e037549 beta-1,4-galactosyltransferase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
InterPro domains Description Start Stop
IPR008166 Glyco_transf_92 219 430
No external refs found!