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  5. Solyc09g098310.3.1

Solyc09g098310.3.1 (Solyc09g098310)


Aliases : Solyc09g098310

Description : no hits & (original description: none)


Gene families : OG0001486 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001486_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc09g098310.3.1
Cluster HCCA: Cluster_62

Target Alias Description ECC score Gene Family Method Actions
AT1G05340 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.03 OrthoFinder output from all 47 species
AT1G56060 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.04 OrthoFinder output from all 47 species
AT2G32200 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.09 OrthoFinder output from all 47 species
AT2G41420 No alias proline-rich family protein 0.03 OrthoFinder output from all 47 species
AT3G22231 PCC1 pathogen and circadian controlled 1 0.04 OrthoFinder output from all 47 species
AT3G22235 No alias BEST Arabidopsis thaliana protein match is: pathogen and... 0.06 OrthoFinder output from all 47 species
Aop_g10575 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01015788001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01015789001 No alias No description available 0.02 OrthoFinder output from all 47 species
LOC_Os03g31679.1 LOC_Os03g31679 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os07g39680.1 LOC_Os07g39680 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os08g10500.1 LOC_Os08g10500 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Lfl_g26349 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g53473 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e010652_P001 Zm00001e010652 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e041650_P001 Zm00001e041650 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001101 response to acid chemical IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0009415 response to water IEP HCCA
BP GO:0009628 response to abiotic stimulus IEP HCCA
BP GO:0010035 response to inorganic substance IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901700 response to oxygen-containing compound IEP HCCA

No InterPro domains available for this sequence

No external refs found!