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  5. Solyc09g092330.3.1

Solyc09g092330.3.1 (GAE6, Solyc09g092330)


Aliases : GAE6, Solyc09g092330

Description : UDP-D-glucuronic acid 4-epimerase


Gene families : OG0000504 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000504_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc09g092330.3.1
Cluster HCCA: Cluster_62

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00038p00035160 GAE1,... Carbohydrate metabolism.nucleotide sugar... 0.08 OrthoFinder output from all 47 species
AT2G45310 GAE4 UDP-D-glucuronate 4-epimerase 4 0.03 OrthoFinder output from all 47 species
AT3G23820 GAE6 UDP-D-glucuronate 4-epimerase 6 0.07 OrthoFinder output from all 47 species
Ala_g37564 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g01238 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g04214 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g04335 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.05G068000.1 GAE1, Ceric.05G068000 UDP-D-glucuronic acid 4-epimerase & original... 0.03 OrthoFinder output from all 47 species
Dac_g20173 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g15331 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g46325 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g03704 GAE2 UDP-D-glucuronic acid 4-epimerase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g06758 GAE2 UDP-D-glucuronic acid 4-epimerase & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g07756 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g23332 GAE2 UDP-D-glucuronic acid 4-epimerase & original description: none 0.02 OrthoFinder output from all 47 species
Gb_06410 GAE2 UDP-D-glucuronic acid 4-epimerase 0.05 OrthoFinder output from all 47 species
LOC_Os08g41440.1 GAE6, LOC_Os08g41440 UDP-D-glucuronic acid 4-epimerase 0.05 OrthoFinder output from all 47 species
LOC_Os09g32670.1 GAE6, LOC_Os09g32670 UDP-D-glucuronic acid 4-epimerase 0.05 OrthoFinder output from all 47 species
Len_g07701 GAE2 UDP-D-glucuronic acid 4-epimerase & original description: none 0.04 OrthoFinder output from all 47 species
Len_g21448 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g04552 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g07788 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g19223 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g18487 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g38573 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g001061 GAE1 UDP-D-glucuronic acid 4-epimerase & original... 0.04 OrthoFinder output from all 47 species
Sam_g10577 No alias UDP-D-glucuronic acid 4-epimerase & original description: none 0.02 OrthoFinder output from all 47 species
Smo77268 GAE1 Carbohydrate metabolism.nucleotide sugar... 0.03 OrthoFinder output from all 47 species
Smo89938 GAE3 Carbohydrate metabolism.nucleotide sugar... 0.04 OrthoFinder output from all 47 species
Solyc08g079440.1.1 GAE5, Solyc08g079440 UDP-D-glucuronic acid 4-epimerase 0.06 OrthoFinder output from all 47 species
Solyc10g018260.1.1 GAE3, Solyc10g018260 UDP-D-glucuronic acid 4-epimerase 0.03 OrthoFinder output from all 47 species
Spa_g10357 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g01952 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR016040 NAD(P)-bd_dom 110 429
No external refs found!