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  5. Solyc09g091440.3.1

Solyc09g091440.3.1 (ATHDA19, HDA1, HD1,...)


Aliases : ATHDA19, HDA1, HD1, ATHD1, HDA19, RPD3A, Solyc09g091440

Description : class-I histone deacetylase. deacetylase component HDA19 of SNL-HDA19 histone deacetylase complex


Gene families : OG0000827 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000827_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc09g091440.3.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00182290 HDA09, HDA9,... Chromatin organisation.histone modifications.histone... 0.03 OrthoFinder output from all 47 species
AMTR_s00083p00043340 HDA6, RTS1,... Chromatin organisation.histone modifications.histone... 0.03 OrthoFinder output from all 47 species
Aop_g01789 ATHDA19, HDA1,... EC_3.5 hydrolase acting on carbon-nitrogen bond, other... 0.02 OrthoFinder output from all 47 species
MA_47814g0010 ATHDA19, HDA1,... class-I histone deacetylase 0.03 OrthoFinder output from all 47 species
Pir_g05454 ATHDA19, HDA1,... EC_3.5 hydrolase acting on carbon-nitrogen bond, other... 0.02 OrthoFinder output from all 47 species
Sam_g11977 No alias EC_3.5 hydrolase acting on carbon-nitrogen bond, other... 0.02 OrthoFinder output from all 47 species
Tin_g03412 ATHDA19, HDA1,... EC_3.5 hydrolase acTing on carbon-nitrogen bond, other... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR023801 His_deacetylse_dom 36 324
No external refs found!