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  5. Solyc09g090940.3.1

Solyc09g090940.3.1 (Solyc09g090940)


Aliases : Solyc09g090940

Description : mRNA endoribonuclease (G3BP)


Gene families : OG0000432 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000432_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc09g090940.3.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g036227 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g056110 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g082579 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g100689 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g108842 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g23469 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g11149 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.02 OrthoFinder output from all 47 species
Cre02.g092400 No alias No description available 0.03 OrthoFinder output from all 47 species
Dac_g00907 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g16542 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.03 OrthoFinder output from all 47 species
Gb_32671 No alias mRNA endoribonuclease (G3BP) 0.03 OrthoFinder output from all 47 species
Gb_35692 No alias mRNA endoribonuclease (G3BP) 0.03 OrthoFinder output from all 47 species
Len_g21624 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.04 OrthoFinder output from all 47 species
Pp3c26_10520V3.1 Pp3c26_10520 Nuclear transport factor 2 (NTF2) family protein with... 0.01 OrthoFinder output from all 47 species
Ppi_g04522 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g07364 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc06g083300.4.1 Solyc06g083300 mRNA endoribonuclease (G3BP) 0.03 OrthoFinder output from all 47 species
Tin_g04096 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e007583_P003 Zm00001e007583 mRNA endoribonuclease (G3BP) 0.03 OrthoFinder output from all 47 species
Zm00001e022613_P001 Zm00001e022613 mRNA endoribonuclease (G3BP) 0.02 OrthoFinder output from all 47 species
Zm00001e035428_P001 Zm00001e035428 mRNA endoribonuclease (G3BP) 0.02 OrthoFinder output from all 47 species
Zm00001e038048_P001 Zm00001e038048 mRNA endoribonuclease (G3BP) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR002075 NTF2_dom 14 128
IPR000504 RRM_dom 316 384
No external refs found!