Solyc09g090460.3.1 (PDE318, Solyc09g090460)

Aliases : PDE318, Solyc09g090460

Description : Nucleolar GTP-binding protein 1 OS=Arabidopsis thaliana (sp|q9c6i8|nog1_arath : 116.0)

Gene families : OG0006383 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006383_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc09g090460.3.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00002p00146270	PDE318,...	Nucleolar GTP-binding protein 1 OS=Arabidopsis thaliana	0.04	OrthoFinder output from all 47 species
Adi_g021598	PDE318	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Als_g15888	PDE318	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Cre08.g384355	No alias	No description available	0.02	OrthoFinder output from all 47 species
GSVIVT01022468001	PDE318	Nucleolar GTP-binding protein 1 OS=Arabidopsis thaliana	0.05	OrthoFinder output from all 47 species
LOC_Os08g06230.1	PDE318, LOC_Os08g06230	Nucleolar GTP-binding protein 1 OS=Arabidopsis thaliana...	0.05	OrthoFinder output from all 47 species
Mp7g04840.1	PDE318	Nucleolar GTP-binding protein 1 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
Ppi_g05831	PDE318	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g18094	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g13322	PDE318	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Zm00001e040209_P002	PDE318, Zm00001e040209	Nucleolar GTP-binding protein 1 OS=Arabidopsis thaliana...	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003677	DNA binding	IEP	HCCA
MF	GO:0003690	double-stranded DNA binding	IEP	HCCA
MF	GO:0004425	indole-3-glycerol-phosphate synthase activity	IEP	HCCA
BP	GO:0006259	DNA metabolic process	IEP	HCCA
BP	GO:0006281	DNA repair	IEP	HCCA
BP	GO:0006298	mismatch repair	IEP	HCCA
BP	GO:0006974	cellular response to DNA damage stimulus	IEP	HCCA
CC	GO:0009507	chloroplast	IEP	HCCA
CC	GO:0009536	plastid	IEP	HCCA
MF	GO:0016830	carbon-carbon lyase activity	IEP	HCCA
MF	GO:0016831	carboxy-lyase activity	IEP	HCCA
MF	GO:0030983	mismatched DNA binding	IEP	HCCA
BP	GO:0033554	cellular response to stress	IEP	HCCA
BP	GO:0051716	cellular response to stimulus	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR041623	NOG1_N	80	238
IPR030389	G_FEOB_dom	244	301
IPR010674	NOG1_Rossman_fold_dom	309	365

External Links

No external refs found!