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  5. Solyc09g090330.3.1

Solyc09g090330.3.1 (FIB4, Solyc09g090330)


Aliases : FIB4, Solyc09g090330

Description : Plastid-lipid-associated protein 6, chloroplastic OS=Arabidopsis thaliana (sp|q9lw57|pap6_arath : 290.0)


Gene families : OG0008073 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008073_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc09g090330.3.1
Cluster HCCA: Cluster_121

Target Alias Description ECC score Gene Family Method Actions
AT3G23400 FIB4 Plastid-lipid associated protein PAP / fibrillin family protein 0.07 OrthoFinder output from all 47 species
Cba_g07385 FIB4 Fibrillin plastoglobule core protein *(FBN4) & original... 0.03 OrthoFinder output from all 47 species
Dac_g11364 FIB4 Fibrillin plastoglobule core protein *(FBN4) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g00596 FIB4 Fibrillin plastoglobule core protein *(FBN4) & original... 0.04 OrthoFinder output from all 47 species
Dde_g18790 FIB4 Fibrillin plastoglobule core protein *(FBN4) & original... 0.04 OrthoFinder output from all 47 species
GSVIVT01027851001 FIB4 Plastid-lipid-associated protein 6, chloroplastic... 0.03 OrthoFinder output from all 47 species
LOC_Os11g38260.1 FIB4, LOC_Os11g38260 Plastid-lipid-associated protein 6, chloroplastic... 0.04 OrthoFinder output from all 47 species
Nbi_g16940 FIB4 Fibrillin plastoglobule core protein *(FBN4) & original... 0.04 OrthoFinder output from all 47 species
Ore_g04923 FIB4 Fibrillin plastoglobule core protein *(FBN4) & original... 0.08 OrthoFinder output from all 47 species
Pnu_g13704 FIB4 Fibrillin plastoglobule core protein *(FBN4) & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
MF GO:0015035 protein-disulfide reductase activity IEP HCCA
MF GO:0015036 disulfide oxidoreductase activity IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016854 racemase and epimerase activity IEP HCCA
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP HCCA
BP GO:0017004 cytochrome complex assembly IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR006843 PAP/fibrillin_dom 79 273
No external refs found!