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  5. Solyc09g083320.1.1

Solyc09g083320.1.1 (PRA1.E, Solyc09g083320)


Aliases : PRA1.E, Solyc09g083320

Description : B-G-class Rab-GDF protein


Gene families : OG0000542 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000542_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc09g083320.1.1
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
Adi_g078334 PRA7, PRA1.F2 B-G-class Rab-GDF protein & original description: none 0.03 OrthoFinder output from all 47 species
Als_g13343 PRA1.B2 B-G-class Rab-GDF protein & original description: none 0.04 OrthoFinder output from all 47 species
Als_g42889 PRA1.B1 B-G-class Rab-GDF protein & original description: none 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020961.80 No alias No description available 0.01 OrthoFinder output from all 47 species
Dde_g13005 PRA1.B5 B-G-class Rab-GDF protein & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g07333 PRA1.B3 B-G-class Rab-GDF protein & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os01g10010.2 PRA1.F3, PRA8,... B-G-class Rab-GDF protein 0.05 OrthoFinder output from all 47 species
Lfl_g04508 PRA1.B1 B-G-class Rab-GDF protein & original description: none 0.02 OrthoFinder output from all 47 species
Mp1g23710.1 PRA1.B4 B-G-class Rab-GDF protein 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
InterPro domains Description Start Stop
IPR004895 Prenylated_rab_accept_PRA1 15 148
No external refs found!