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  5. Solyc09g082580.4.1

Solyc09g082580.4.1 (Solyc09g082580)


Aliases : Solyc09g082580

Description : VAN3-binding protein OS=Arabidopsis thaliana (sp|q8w4k5|vab_arath : 292.0)


Gene families : OG0001358 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001358_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc09g082580.4.1
Cluster HCCA: Cluster_444

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00109p00139910 evm_27.TU.AmTr_v1... VAN3-binding protein OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01018032001 No alias VAN3-binding protein OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
LOC_Os12g41140.1 LOC_Os12g41140 VAN3-binding protein OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Mp5g17610.1 No alias VAN3-binding protein OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Msp_g08326 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g10006 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g14997 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g25568 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR008546 VAN3-bd-like_auxin_canal 13 314
IPR013666 PH_pln 351 453
No external refs found!