1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc09g074760.1.1

Solyc09g074760.1.1 (NF-YB5, Solyc09g074760)


Aliases : NF-YB5, Solyc09g074760

Description : component NF-YB of NF-Y transcription factor complex


Gene families : OG0000364 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000364_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc09g074760.1.1
Cluster HCCA: Cluster_65

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00239530 NF-YB3,... RNA biosynthesis.transcriptional activation.NF-Y... 0.03 OrthoFinder output from all 47 species
AMTR_s00057p00202310 NF-YB5,... RNA biosynthesis.transcriptional activation.NF-Y... 0.07 OrthoFinder output from all 47 species
AT2G47810 NF-YB5 nuclear factor Y, subunit B5 0.03 OrthoFinder output from all 47 species
AT5G47670 NF-YB6, L1L nuclear factor Y, subunit B6 0.03 OrthoFinder output from all 47 species
Ala_g15546 NF-YB3 component *(NF-YB) of NF-Y transcription factor complex... 0.02 OrthoFinder output from all 47 species
Als_g07575 EMB212, NF-YB9,... transcription factor *(LEC) involved in seed maturation... 0.02 OrthoFinder output from all 47 species
Aop_g70431 NF-YB3 component *(NF-YB) of NF-Y transcription factor complex... 0.03 OrthoFinder output from all 47 species
Aspi01Gene16041.t1 NF-YB6, L1L,... transcription factor *(LEC) involved in seed maturation... 0.09 OrthoFinder output from all 47 species
Aspi01Gene41539.t1 NF-YB3, Aspi01Gene41539 component *(NF-YB) of NF-Y transcription factor complex... 0.03 OrthoFinder output from all 47 species
Azfi_s1600.g104553 EMB212, NF-YB9,... transcription factor *(LEC) involved in seed maturation... 0.03 OrthoFinder output from all 47 species
Ceric.18G000500.1 NF-YB3, Ceric.18G000500 component *(NF-YB) of NF-Y transcription factor complex... 0.05 OrthoFinder output from all 47 species
GSVIVT01002895001 NF-YB6, L1L RNA biosynthesis.transcriptional activation.NF-Y... 0.03 OrthoFinder output from all 47 species
GSVIVT01010264001 NF-YB5 RNA biosynthesis.transcriptional activation.NF-Y... 0.07 OrthoFinder output from all 47 species
GSVIVT01010959001 NF-YB5 RNA biosynthesis.transcriptional activation.NF-Y... 0.02 OrthoFinder output from all 47 species
GSVIVT01014689001 NF-YB6, L1L RNA biosynthesis.transcriptional activation.NF-Y... 0.05 OrthoFinder output from all 47 species
GSVIVT01022214001 NF-YB3 RNA biosynthesis.transcriptional activation.NF-Y... 0.03 OrthoFinder output from all 47 species
LOC_Os07g41580.1 NF-YB3, LOC_Os07g41580 component NF-YB of NF-Y transcription factor complex 0.03 OrthoFinder output from all 47 species
Nbi_g04631 NF-YB3 component *(NF-YB) of NF-Y transcription factor complex... 0.03 OrthoFinder output from all 47 species
Ore_g19132 NF-YB6, L1L transcription factor *(LEC) involved in seed maturation... 0.03 OrthoFinder output from all 47 species
Pnu_g04888 NF-YB6, L1L not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g10547 NF-YB3 component *(NF-YB) of NF-Y transcription factor complex... 0.02 OrthoFinder output from all 47 species
Pnu_g20609 NF-YB3 component *(NF-YB) of NF-Y transcription factor complex... 0.05 OrthoFinder output from all 47 species
Solyc01g067130.4.1 NF-YB5, Solyc01g067130 component NF-YB of NF-Y transcription factor complex 0.05 OrthoFinder output from all 47 species
Solyc01g099320.4.1 NF-YB5, Solyc01g099320 component NF-YB of NF-Y transcription factor complex 0.04 OrthoFinder output from all 47 species
Solyc05g005390.3.1 NF-YB6, L1L,... component NF-YB of NF-Y transcription factor complex 0.03 OrthoFinder output from all 47 species
Zm00001e010728_P001 NF-YB3, Zm00001e010728 component NF-YB of NF-Y transcription factor complex 0.05 OrthoFinder output from all 47 species
Zm00001e015700_P001 NF-YB6, L1L,... component NF-YB of NF-Y transcription factor complex 0.05 OrthoFinder output from all 47 species
Zm00001e021676_P001 NF-YB3, Zm00001e021676 component NF-YB of NF-Y transcription factor complex 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
InterPro domains Description Start Stop
IPR003958 CBFA_NFYB_domain 25 89
No external refs found!