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Aliases : Solyc09g074330
Description : transcription factor (NDX)
Gene families : OG0003424 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003424_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Solyc09g074330.3.1 | |
| Cluster | HCCA: Cluster_74 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00025p00031700 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.HB... | 0.03 | OrthoFinder output from all 47 species | |
| AT4G03090 | No alias | sequence-specific DNA binding;sequence-specific DNA... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g011555 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g086373 | No alias | NDX-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g02709 | No alias | NDX-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g06805 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g22927 | No alias | NDX-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g13614 | No alias | NDX-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g07774 | No alias | NDX-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g08164 | No alias | NDX-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os05g09630.1 | LOC_Os05g09630 | transcription factor (NDX) | 0.04 | OrthoFinder output from all 47 species | |
| Mp1g16560.1 | No alias | transcription factor (NDX) | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g43437 | No alias | NDX-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g44275 | No alias | NDX-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g29462 | No alias | NDX-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g30227 | No alias | NDX-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Smo446032 | No alias | RNA biosynthesis.transcriptional activation.HB... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e011342_P004 | Zm00001e011342 | transcription factor (NDX) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e021086_P004 | Zm00001e021086 | transcription factor (NDX) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000226 | microtubule cytoskeleton organization | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| CC | GO:0005634 | nucleus | IEP | HCCA |
| CC | GO:0005875 | microtubule associated complex | IEP | HCCA |
| BP | GO:0006479 | protein methylation | IEP | HCCA |
| BP | GO:0006996 | organelle organization | IEP | HCCA |
| BP | GO:0007010 | cytoskeleton organization | IEP | HCCA |
| BP | GO:0007017 | microtubule-based process | IEP | HCCA |
| BP | GO:0007051 | spindle organization | IEP | HCCA |
| MF | GO:0008170 | N-methyltransferase activity | IEP | HCCA |
| BP | GO:0008213 | protein alkylation | IEP | HCCA |
| MF | GO:0008270 | zinc ion binding | IEP | HCCA |
| MF | GO:0008276 | protein methyltransferase activity | IEP | HCCA |
| MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | HCCA |
| MF | GO:0016278 | lysine N-methyltransferase activity | IEP | HCCA |
| MF | GO:0016279 | protein-lysine N-methyltransferase activity | IEP | HCCA |
| BP | GO:0016570 | histone modification | IEP | HCCA |
| BP | GO:0016571 | histone methylation | IEP | HCCA |
| BP | GO:0018022 | peptidyl-lysine methylation | IEP | HCCA |
| MF | GO:0018024 | histone lysine N-methyltransferase activity | IEP | HCCA |
| BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
| BP | GO:0018205 | peptidyl-lysine modification | IEP | HCCA |
| BP | GO:0022402 | cell cycle process | IEP | HCCA |
| BP | GO:0032259 | methylation | IEP | HCCA |
| BP | GO:0034968 | histone lysine methylation | IEP | HCCA |
| MF | GO:0042054 | histone methyltransferase activity | IEP | HCCA |
| CC | GO:0043227 | membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | HCCA |
| BP | GO:0043414 | macromolecule methylation | IEP | HCCA |
| BP | GO:0051225 | spindle assembly | IEP | HCCA |
| CC | GO:0070652 | HAUS complex | IEP | HCCA |
| BP | GO:0070925 | organelle assembly | IEP | HCCA |
| BP | GO:0140694 | non-membrane-bounded organelle assembly | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |