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  5. Solyc09g072990.3.1

Solyc09g072990.3.1 (Solyc09g072990)


Aliases : Solyc09g072990

Description : no hits & (original description: none)


Gene families : OG0003020 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003020_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc09g072990.3.1

Target Alias Description ECC score Gene Family Method Actions
AT4G02920 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.07 OrthoFinder output from all 47 species
Adi_g011392 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g114477 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g10275 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.38G042600.1 Ceric.38G042600 not classified & original description: pacid=50579700... 0.05 OrthoFinder output from all 47 species
Dcu_g01412 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01011074001 No alias No description available 0.05 OrthoFinder output from all 47 species
Gb_03323 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os05g05140.1 LOC_Os05g05140 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Pir_g17575 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g09758 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0212.g025958 No alias not classified & original description: CDS=250-1473 0.03 OrthoFinder output from all 47 species
Sam_g03382 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g39921 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g19221 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e040395_P001 Zm00001e040395 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008883 glutamyl-tRNA reductase activity IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!