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  5. Solyc09g065590.3.1

Solyc09g065590.3.1 (Solyc09g065590)


Aliases : Solyc09g065590

Description : VAN3-binding protein OS=Arabidopsis thaliana (sp|q8w4k5|vab_arath : 357.0)


Gene families : OG0001358 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001358_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Solyc09g065590.3.1

Target Alias Description ECC score Gene Family Method Actions
AT3G63300 FKD1 FORKED 1 0.04 OrthoFinder output from all 47 species
AT4G14740 No alias Plant protein of unknown function (DUF828) with plant... 0.05 OrthoFinder output from all 47 species
Ala_g06549 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0001.g000245 No alias not classified & original description: CDS=137-1642 0.03 OrthoFinder output from all 47 species
MA_90368g0010 No alias VAN3-binding protein OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Spa_g25568 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e012419_P002 Zm00001e012419 VAN3-binding protein OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006353 DNA-templated transcription termination IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR013666 PH_pln 373 478
IPR008546 VAN3-bd-like_auxin_canal 15 329
No external refs found!