Solyc09g065540.3.1 (MCCA, Solyc09g065540)

Aliases : MCCA, Solyc09g065540

Description : subunit alpha of methylcrotonoyl-CoA carboxylase complex

Gene families : OG0001087 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001087_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc09g065540.3.1

Target	Alias	Description	ECC score	Gene Family Method
AT1G03090	MCCA	methylcrotonyl-CoA carboxylase alpha chain,...	0.04	OrthoFinder output from all 47 species
Ceric.23G000300.1	MCCA, Ceric.23G000300	EC_6.4 ligase forming carbon-carbon bond & original...	0.03	OrthoFinder output from all 47 species
Cre06.g278098	MCCA	Amino acid metabolism.degradation.branched-chain amino...	0.07	OrthoFinder output from all 47 species
Dac_g01709	CAC2	EC_6.4 ligase forming carbon-carbon bond & original...	0.03	OrthoFinder output from all 47 species
GSVIVT01001194001	MCCA	Amino acid metabolism.degradation.branched-chain amino...	0.03	OrthoFinder output from all 47 species
Gb_08288	MCCA	subunit alpha of methylcrotonoyl-CoA carboxylase complex	0.04	OrthoFinder output from all 47 species
LOC_Os12g41250.1	MCCA, LOC_Os12g41250	subunit alpha of methylcrotonoyl-CoA carboxylase complex	0.06	OrthoFinder output from all 47 species
Mp8g15290.1	MCCA	subunit alpha of methylcrotonoyl-CoA carboxylase complex	0.03	OrthoFinder output from all 47 species
Ore_g18071	MCCA	EC_6.4 ligase forming carbon-carbon bond & original...	0.03	OrthoFinder output from all 47 species
Smo411779	MCCA	Amino acid metabolism.degradation.branched-chain amino...	0.03	OrthoFinder output from all 47 species
Spa_g11171	MCCA	EC_6.4 ligase forming carbon-carbon bond & original...	0.03	OrthoFinder output from all 47 species
Zm00001e003196_P001	MCCA, Zm00001e003196	subunit alpha of methylcrotonoyl-CoA carboxylase complex	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0006629	lipid metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR005482	Biotin_COase_C	374	482
IPR000089	Biotin_lipoyl	666	731
IPR005481	BC-like_N	39	147
IPR005479	CbamoylP_synth_lsu-like_ATP-bd	152	360

External Links

No external refs found!