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  5. Solyc09g065290.4.1

Solyc09g065290.4.1 (Solyc09g065290)


Aliases : Solyc09g065290

Description : component WDR5 of COMPASS histone trimethylation complex


Gene families : OG0001739 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001739_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc09g065290.4.1

Target Alias Description ECC score Gene Family Method Actions
Ppi_g02830 No alias substrate adaptor *(DHU1) of CUL4-based ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Smo169971 No alias Chromatin organisation.histone modifications.histone... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004325 ferrochelatase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
BP GO:0006783 heme biosynthetic process IEP HCCA
BP GO:0016073 snRNA metabolic process IEP HCCA
BP GO:0016180 snRNA processing IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
BP GO:0031123 RNA 3'-end processing IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034472 snRNA 3'-end processing IEP HCCA
BP GO:0034477 U6 snRNA 3'-end processing IEP HCCA
BP GO:0042168 heme metabolic process IEP HCCA
BP GO:0042440 pigment metabolic process IEP HCCA
BP GO:0046148 pigment biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 274 312
IPR001680 WD40_repeat 103 139
IPR001680 WD40_repeat 229 269
IPR001680 WD40_repeat 20 55
IPR001680 WD40_repeat 62 97
IPR001680 WD40_repeat 143 181
IPR001680 WD40_repeat 199 224
No external refs found!