Solyc09g065280.4.1 (Solyc09g065280)

Aliases : Solyc09g065280

Description : no hits & (original description: none)

Gene families : OG0004286 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004286_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc09g065280.4.1

Target	Alias	Description	ECC score	Gene Family Method
Adi_g008939	No alias	splicing factor *(PRP18) & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g02165	No alias	splicing factor *(PRP18) & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.20G033500.1	Ceric.20G033500	splicing factor *(PRP18) & original description:...	0.02	OrthoFinder output from all 47 species
Cre13.g567750	No alias	No description available	0.01	OrthoFinder output from all 47 species
Gb_09584	No alias	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Lfl_g03858	No alias	splicing factor *(PRP18) & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005681	spliceosomal complex	IEA	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006396	RNA processing	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008380	RNA splicing	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
CC	GO:0140513	nuclear protein-containing complex	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0005096	GTPase activator activity	IEP	HCCA
BP	GO:0006259	DNA metabolic process	IEP	HCCA
BP	GO:0006281	DNA repair	IEP	HCCA
BP	GO:0006886	intracellular protein transport	IEP	HCCA
BP	GO:0006974	cellular response to DNA damage stimulus	IEP	HCCA
MF	GO:0008047	enzyme activator activity	IEP	HCCA
BP	GO:0022613	ribonucleoprotein complex biogenesis	IEP	HCCA
MF	GO:0030695	GTPase regulator activity	IEP	HCCA
BP	GO:0033554	cellular response to stress	IEP	HCCA
BP	GO:0042254	ribosome biogenesis	IEP	HCCA
BP	GO:0044085	cellular component biogenesis	IEP	HCCA
BP	GO:0051716	cellular response to stimulus	IEP	HCCA
MF	GO:0060589	nucleoside-triphosphatase regulator activity	IEP	HCCA
MF	GO:0140677	molecular function activator activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR014906	PRP4-like	108	134
IPR004098	Prp18	230	370

External Links

No external refs found!