1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc09g065190.3.1

Solyc09g065190.3.1 (RANGAP2, Solyc09g065190)


Aliases : RANGAP2, Solyc09g065190

Description : GTPase activating component Ran-GAP of nucleocytoplasmic transport


Gene families : OG0003182 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003182_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc09g065190.3.1
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
AT3G63130 RANGAP1, ATRANGAP1 RAN GTPase activating protein 1 0.04 OrthoFinder output from all 47 species
Dcu_g01851 RANGAP2 Ran-activating protein of nucleocytoplasmic transport &... 0.02 OrthoFinder output from all 47 species
Dcu_g06325 RANGAP2 Ran-activating protein of nucleocytoplasmic transport &... 0.02 OrthoFinder output from all 47 species
Dcu_g07025 RANGAP2 Ran-activating protein of nucleocytoplasmic transport &... 0.05 OrthoFinder output from all 47 species
GSVIVT01011081001 RANGAP2 RAN GTPase-activating protein 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
LOC_Os05g46560.1 RANGAP2, LOC_Os05g46560 GTPase activating component Ran-GAP of nucleocytoplasmic... 0.02 OrthoFinder output from all 47 species
Ppi_g03071 RANGAP2 Ran-activating protein of nucleocytoplasmic transport &... 0.03 OrthoFinder output from all 47 species
Sam_g27800 No alias Ran-activating protein of nucleocytoplasmic transport &... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004797 thymidine kinase activity IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019136 deoxynucleoside kinase activity IEP HCCA
MF GO:0019205 nucleobase-containing compound kinase activity IEP HCCA
MF GO:0019206 nucleoside kinase activity IEP HCCA
MF GO:0043015 gamma-tubulin binding IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
InterPro domains Description Start Stop
IPR025265 WPP_dom 7 101
IPR001611 Leu-rich_rpt 210 229
IPR001611 Leu-rich_rpt 406 427
IPR001611 Leu-rich_rpt 320 342
No external refs found!