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  5. Solyc09g061340.1.1

Solyc09g061340.1.1 (OTP84, Solyc09g061340)


Aliases : OTP84, Solyc09g061340

Description : Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana (sp|q9sit7|pp151_arath : 346.0)


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc09g061340.1.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g004447 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g14476 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Aspi01Gene03740.t1 Aspi01Gene03740 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene08990.t1 OTP84, Aspi01Gene08990 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene25447.t1 Aspi01Gene25447 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene31476.t1 Aspi01Gene31476 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.05G035800.1 Ceric.05G035800 not classified & original description: pacid=50577834... 0.06 OrthoFinder output from all 47 species
Ceric.10G007000.1 Ceric.10G007000 not classified & original description: pacid=50613077... 0.03 OrthoFinder output from all 47 species
Ceric.18G013900.1 Ceric.18G013900 not classified & original description: pacid=50622476... 0.03 OrthoFinder output from all 47 species
Dcu_g41962 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g47510 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Lfl_g07120 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0005.g002764 No alias not classified & original description: CDS=1-2754 0.01 OrthoFinder output from all 47 species
Sam_g33599 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 52 77
IPR002885 Pentatricopeptide_repeat 375 401
IPR002885 Pentatricopeptide_repeat 404 429
IPR002885 Pentatricopeptide_repeat 344 365
IPR002885 Pentatricopeptide_repeat 159 207
IPR002885 Pentatricopeptide_repeat 508 555
IPR002885 Pentatricopeptide_repeat 576 608
No external refs found!