1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc09g055880.1.1

Solyc09g055880.1.1 (AGD11, Solyc09g055880)


Aliases : AGD11, Solyc09g055880

Description : Calmodulin-like protein 3 OS=Arabidopsis thaliana (sp|q9srr7|cml3_arath : 195.0)


Gene families : OG0000205 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000205_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc09g055880.1.1
Cluster HCCA: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
AT2G43290 MSS3 Calcium-binding EF-hand family protein 0.04 OrthoFinder output from all 47 species
AT4G03290 No alias EF hand calcium-binding protein family 0.04 OrthoFinder output from all 47 species
AT4G12860 UNE14 EF hand calcium-binding protein family 0.11 OrthoFinder output from all 47 species
Adi_g017794 UNE14 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g05860 UNE14 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g20328 UNE14 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g39162 CML43 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g03940 UNE14 calcium sensor *(CML) & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g36467 UNE14 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g39505 UNE14 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34969.t1 UNE14, Aspi01Gene34969 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene40816.t1 UNE14, Aspi01Gene40816 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene57523.t1 CML43, Aspi01Gene57523 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene57526.t1 CML43, Aspi01Gene57526 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0143.g051443 UNE14 calcium sensor *(CML) & original description: CDS=1-462 0.02 OrthoFinder output from all 47 species
Dcu_g37155 UNE14 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g41575 UNE14 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g06167 CML42 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g06196 AGD11 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os02g39380.1 AGD11, LOC_Os02g39380 Probable calcium-binding protein CML17 OS=Oryza sativa... 0.06 OrthoFinder output from all 47 species
LOC_Os03g21380.2 CML42, LOC_Os03g21380 Probable calcium-binding protein CML27 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
LOC_Os06g07560.1 UNE14, LOC_Os06g07560 Probable calcium-binding protein CML30 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
MA_103558g0010 UNE14 Calcium-binding protein CML42 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_269415g0010 AGD11 Calmodulin-like protein 5 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
MA_8749g0010 CML43 Calcium-binding protein CML42 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp6g10070.1 UNE14 Calmodulin-like protein 5 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Msp_g25033 UNE14 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g29580 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g14285 UNE14 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g28765 CML43 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g04585 UNE14 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g04586 UNE14 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g15629 CML42 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g03113 UNE14 calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g08284 UNE14 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g12500 UNE14 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g30086 UNE14 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g33330 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e001557_P001 CML42, Zm00001e001557 Probable calcium-binding protein CML27 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
Zm00001e039793_P001 AGD11, Zm00001e039793 Probable calcium-binding protein CML28 OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0004427 inorganic diphosphate phosphatase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 5 67
IPR002048 EF_hand_dom 76 142
No external refs found!