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  5. Solyc09g031930.3.1

Solyc09g031930.3.1 (Solyc09g031930)


Aliases : Solyc09g031930

Description : KH domain-containing protein At2g38610 OS=Arabidopsis thaliana (sp|q9zvi3|qkil3_arath : 440.0)


Gene families : OG0001245 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001245_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc09g031930.3.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00071p00192730 evm_27.TU.AmTr_v1... KH domain-containing protein At1g09660/At1g09670... 0.03 OrthoFinder output from all 47 species
AT5G56140 No alias RNA-binding KH domain-containing protein 0.04 OrthoFinder output from all 47 species
Adi_g018194 No alias STAR-type post-transcriptionally regulatory factor &... 0.05 OrthoFinder output from all 47 species
Adi_g020660 No alias STAR-type post-transcriptionally regulatory factor &... 0.02 OrthoFinder output from all 47 species
Adi_g083485 No alias STAR-type post-transcriptionally regulatory factor &... 0.02 OrthoFinder output from all 47 species
Aev_g07068 No alias STAR-type post-transcriptionally regulatory factor &... 0.03 OrthoFinder output from all 47 species
Als_g12293 No alias STAR-type post-transcriptionally regulatory factor &... 0.03 OrthoFinder output from all 47 species
Aob_g17232 No alias STAR-type post-transcriptionally regulatory factor &... 0.03 OrthoFinder output from all 47 species
Cba_g12930 No alias STAR-type post-transcriptionally regulatory factor &... 0.02 OrthoFinder output from all 47 species
Cba_g12931 No alias STAR-type post-transcriptionally regulatory factor &... 0.02 OrthoFinder output from all 47 species
Dcu_g44559 No alias STAR-type post-transcriptionally regulatory factor &... 0.03 OrthoFinder output from all 47 species
Ehy_g15044 No alias STAR-type post-transcriptionally regulatory factor &... 0.02 OrthoFinder output from all 47 species
Ehy_g23208 No alias STAR-type post-transcriptionally regulatory factor &... 0.03 OrthoFinder output from all 47 species
Len_g58637 No alias STAR-type post-transcriptionally regulatory factor &... 0.03 OrthoFinder output from all 47 species
Zm00001e023400_P001 Zm00001e023400 KH domain-containing protein At5g56140 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e033145_P002 Zm00001e033145 KH domain-containing protein SPIN1 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000813 ESCRT I complex IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0016197 endosomal transport IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0032509 endosome transport via multivesicular body sorting pathway IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
CC GO:0036452 ESCRT complex IEP HCCA
BP GO:0071985 multivesicular body sorting pathway IEP HCCA
InterPro domains Description Start Stop
IPR032377 STAR_dimer 27 73
IPR004088 KH_dom_type_1 144 185
No external refs found!