1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc09g031850.1.1

Solyc09g031850.1.1 (YCF2.1, Solyc09g031850)


Aliases : YCF2.1, Solyc09g031850

Description : Protein Ycf2 OS=Solanum tuberosum (sp|q27ry7|ycf2_soltu : 146.0)


Gene families : OG0003470 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003470_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc09g031850.1.1
Cluster HCCA: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
Solyc01g017130.1.1 YCF2.1, Solyc01g017130 Protein Ycf2 OS=Solanum tuberosum (sp|q27ry7|ycf2_soltu : 147.0) 0.04 OrthoFinder output from all 47 species
Solyc01g017280.1.1 YCF2.1, Solyc01g017280 Protein Ycf2 OS=Solanum lycopersicum... 0.05 OrthoFinder output from all 47 species
Solyc02g014780.1.1 YCF2.1, Solyc02g014780 Protein Ycf2 OS=Nicotiana tabacum (sp|p09976|ycf2_tobac : 133.0) 0.05 OrthoFinder output from all 47 species
Solyc04g024560.3.1 YCF2.1, Solyc04g024560 Protein Ycf2 OS=Solanum tuberosum (sp|q27ry7|ycf2_soltu : 162.0) 0.04 OrthoFinder output from all 47 species
Solyc08g029410.1.1 YCF2.1, Solyc08g029410 Protein Ycf2 OS=Solanum lycopersicum... 0.05 OrthoFinder output from all 47 species
Solyc11g062040.1.1 YCF2.1, Solyc11g062040 Protein Ycf2 A OS=Atropa belladonna... 0.04 OrthoFinder output from all 47 species
Solyc12g035990.1.1 YCF2.1, Solyc12g035990 Protein Ycf2 OS=Solanum bulbocastanum... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!