Solyc09g031650.3.1 (Solyc09g031650)


Aliases : Solyc09g031650

Description : no hits & (original description: none)


Gene families : OG0002719 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002719_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc09g031650.3.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00190880 evm_27.TU.AmTr_v1... No description available 0.06 OrthoFinder output from all 47 species
Adi_g018403 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g018524 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g076695 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g077934 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g077938 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g105443 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g117666 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g15247 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene60844.t1 Aspi01Gene60844 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0060.g034750 No alias not classified & original description: CDS=32-3943 0.02 OrthoFinder output from all 47 species
Cba_g11705 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.08G054400.1 Ceric.08G054400 not classified & original description: pacid=50638201... 0.09 OrthoFinder output from all 47 species
Dcu_g04146 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g23055 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Ehy_g30974 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01024823001 No alias No description available 0.14 OrthoFinder output from all 47 species
Gb_01281 No alias no hits & (original description: none) 0.12 OrthoFinder output from all 47 species
LOC_Os12g05920.1 LOC_Os12g05920 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g24505 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07443 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
MA_109416g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Ore_g06792 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g18248 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g33275 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g37630 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g37822 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g11567 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pnu_g23522 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g25693 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g32815 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0109.g020564 No alias not classified & original description: CDS=1-2943 0.06 OrthoFinder output from all 47 species
Sam_g40488 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g03800 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g45301 PARL1, ATNUC-L1, NUC-L1 regulatory protein *(NCL) of rRNA transcription &... 0.03 OrthoFinder output from all 47 species
Zm00001e020396_P001 Zm00001e020396 no hits & (original description: none) 0.1 OrthoFinder output from all 47 species
Zm00001e027931_P001 Zm00001e027931 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005669 transcription factor TFIID complex IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
MF GO:0017056 structural constituent of nuclear pore IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!