Solyc09g019970.3.1 (ATUBP5, UBP5, PDE323,...)

Aliases : ATUBP5, UBP5, PDE323, Solyc09g019970

Description : deubiquitinase (UBP5|8-11)

Gene families : OG0001745 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001745_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc09g019970.3.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00020p00234520	ATUBP5, UBP5,...	Protein degradation.peptidase families.cysteine-type...	0.03	OrthoFinder output from all 47 species
AT2G40930	ATUBP5, UBP5, PDE323	ubiquitin-specific protease 5	0.06	OrthoFinder output from all 47 species
Aev_g07324	ATUBP5, UBP5, PDE323	deubiquitinase *(UBP5/8-11) & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g07429	ATUBP5, UBP5, PDE323	deubiquitinase *(UBP5/8-11) & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g00801	UBP10	deubiquitinase *(UBP5/8-11) & original description: none	0.03	OrthoFinder output from all 47 species
Cre02.g117850	UBP11	Protein degradation.peptidase families.cysteine-type...	0.02	OrthoFinder output from all 47 species
Dcu_g08300	ATUBP5, UBP5, PDE323	deubiquitinase *(UBP5/8-11) & original description: none	0.04	OrthoFinder output from all 47 species
Ehy_g09720	ATUBP5, UBP5, PDE323	not classified & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01001899001	ATUBP5, UBP5, PDE323	Protein degradation.peptidase families.cysteine-type...	0.09	OrthoFinder output from all 47 species
GSVIVT01019677001	UBP10	Protein degradation.peptidase families.cysteine-type...	0.03	OrthoFinder output from all 47 species
GSVIVT01022582001	UBP8	Protein degradation.peptidase families.cysteine-type...	0.03	OrthoFinder output from all 47 species
LOC_Os11g28360.1	ATUBP5, UBP5,...	Ubiquitin carboxyl-terminal hydrolase 5 OS=Arabidopsis...	0.06	OrthoFinder output from all 47 species
LOC_Os11g28365.1	ATUBP5, UBP5,...	deubiquitinase (UBP5\|8-11)	0.02	OrthoFinder output from all 47 species
LOC_Os12g42600.1	UBP8, LOC_Os12g42600	deubiquitinase (UBP5\|8-11)	0.02	OrthoFinder output from all 47 species
Len_g08177	ATUBP5, UBP5, PDE323	deubiquitinase *(UBP5/8-11) & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g02368	ATUBP5, UBP5, PDE323	deubiquitinase *(UBP5/8-11) & original description: none	0.05	OrthoFinder output from all 47 species
MA_10425850g0010	ATUBP5, UBP5, PDE323	Ubiquitin carboxyl-terminal hydrolase 5 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
MA_10436012g0010	ATUBP5, UBP5, PDE323	deubiquitinase (UBP5\|8-11)	0.03	OrthoFinder output from all 47 species
MA_11753g0010	UBP9	deubiquitinase (UBP5\|8-11)	0.03	OrthoFinder output from all 47 species
Msp_g00705	ATUBP5, UBP5, PDE323	deubiquitinase *(UBP5/8-11) & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g01688	UBP10	deubiquitinase *(UBP5/8-11) & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g19443	No alias	deubiquitinase *(UBP5/8-11) & original description: none	0.04	OrthoFinder output from all 47 species
Spa_g26241	UBP10	deubiquitinase *(UBP5/8-11) & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e008908_P001	ATUBP5, UBP5,...	deubiquitinase (UBP5\|8-11)	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004843	cysteine-type deubiquitinase activity	IEA	Interproscan
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0008234	cysteine-type peptidase activity	None	Extended
BP	GO:0016579	protein deubiquitination	IEA	Interproscan
MF	GO:0016787	hydrolase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019783	ubiquitin-like protein peptidase activity	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0070646	protein modification by small protein removal	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0101005	deubiquitinase activity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0004197	cysteine-type endopeptidase activity	IEP	HCCA
MF	GO:0004198	calcium-dependent cysteine-type endopeptidase activity	IEP	HCCA
MF	GO:0004386	helicase activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
MF	GO:0005524	ATP binding	IEP	HCCA
MF	GO:0008270	zinc ion binding	IEP	HCCA
MF	GO:0030554	adenyl nucleotide binding	IEP	HCCA
MF	GO:0032559	adenyl ribonucleotide binding	IEP	HCCA
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	HCCA
MF	GO:0043167	ion binding	IEP	HCCA
MF	GO:0044877	protein-containing complex binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001394	Peptidase_C19_UCH	304	909
IPR006615	Pept_C19_DUSP	24	129

External Links

No external refs found!

Solyc09g019970.3.1 (ATUBP5, UBP5, PDE323,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation