LOC_Os03g52650.1


Description : Qa-SNARE component KNOLLE of SNARE cell-plate vesicle fusion complex. SYP1-group Qa-type SNARE component


Gene families : OG_01_0000372 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000372_tree ,
OG_02_0000804 (LandPlants) Phylogenetic Tree(s): OG_02_0000804_tree ,
OG_03_0000894 (SeedPlants) Phylogenetic Tree(s): OG_03_0000894_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g52650.1
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00235020 evm_27.TU.AmTr_v1... Vesicle trafficking.SNARE target membrane recognition... 0.07 Archaeplastida
AMTR_s00045p00039700 evm_27.TU.AmTr_v1... Vesicle trafficking.SNARE target membrane recognition... 0.09 Archaeplastida
AMTR_s00103p00119740 evm_27.TU.AmTr_v1... Vesicle trafficking.SNARE target membrane recognition... 0.1 Archaeplastida
AT1G08560 SYP111, ATSYP111, KN syntaxin of plants 111 0.08 Archaeplastida
GSVIVT01023788001 No alias Syntaxin-112 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01035559001 No alias Vesicle trafficking.SNARE target membrane recognition... 0.2 Archaeplastida
MA_132768g0010 No alias SYP1-group Qa-type SNARE component 0.02 Archaeplastida
Smo130326 No alias Vesicle trafficking.SNARE target membrane recognition... 0.07 Archaeplastida
Smo25349 No alias Vesicle trafficking.SNARE target membrane recognition... 0.02 Archaeplastida
Solyc01g109750.2.1 No alias SYP1-group Qa-type SNARE component 0.16 Archaeplastida
Solyc06g053760.3.1 No alias Qa-SNARE component KNOLLE of SNARE cell-plate vesicle... 0.2 Archaeplastida
Zm00001e005594_P001 No alias Qa-SNARE component KNOLLE of SNARE cell-plate vesicle... 0.06 Archaeplastida
Zm00001e011479_P001 No alias SYP1-group Qa-type SNARE component 0.02 Archaeplastida
Zm00001e012082_P001 No alias Qa-SNARE component KNOLLE of SNARE cell-plate vesicle... 0.16 Archaeplastida
AMTR_s00045p00039700 evm_27.TU.AmTr_v1... Vesicle trafficking.SNARE target membrane recognition... 0.09 LandPlants
AMTR_s00103p00119740 evm_27.TU.AmTr_v1... Vesicle trafficking.SNARE target membrane recognition... 0.09 LandPlants
AT1G08560 SYP111, ATSYP111, KN syntaxin of plants 111 0.08 LandPlants
GSVIVT01030578001 No alias Vesicle trafficking.SNARE target membrane recognition... 0.02 LandPlants
GSVIVT01035559001 No alias Vesicle trafficking.SNARE target membrane recognition... 0.2 LandPlants
Smo130326 No alias Vesicle trafficking.SNARE target membrane recognition... 0.07 LandPlants
Smo25349 No alias Vesicle trafficking.SNARE target membrane recognition... 0.02 LandPlants
Solyc06g053760.3.1 No alias Qa-SNARE component KNOLLE of SNARE cell-plate vesicle... 0.19 LandPlants
Zm00001e005594_P001 No alias Qa-SNARE component KNOLLE of SNARE cell-plate vesicle... 0.05 LandPlants
Zm00001e012082_P001 No alias Qa-SNARE component KNOLLE of SNARE cell-plate vesicle... 0.14 LandPlants
AMTR_s00045p00039700 evm_27.TU.AmTr_v1... Vesicle trafficking.SNARE target membrane recognition... 0.09 SeedPlants
AMTR_s00103p00119740 evm_27.TU.AmTr_v1... Vesicle trafficking.SNARE target membrane recognition... 0.09 SeedPlants
AT1G08560 SYP111, ATSYP111, KN syntaxin of plants 111 0.07 SeedPlants
GSVIVT01030578001 No alias Vesicle trafficking.SNARE target membrane recognition... 0.02 SeedPlants
GSVIVT01035559001 No alias Vesicle trafficking.SNARE target membrane recognition... 0.21 SeedPlants
Solyc01g109750.2.1 No alias SYP1-group Qa-type SNARE component 0.15 SeedPlants
Solyc06g053760.3.1 No alias Qa-SNARE component KNOLLE of SNARE cell-plate vesicle... 0.19 SeedPlants
Zm00001e005594_P001 No alias Qa-SNARE component KNOLLE of SNARE cell-plate vesicle... 0.05 SeedPlants
Zm00001e012082_P001 No alias Qa-SNARE component KNOLLE of SNARE cell-plate vesicle... 0.13 SeedPlants

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000727 T_SNARE_dom 249 301
IPR006011 Syntaxin_N 42 248
No external refs found!