- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : AtVSR2, BP80-1;2, VSR2, VSR1;2, Solyc09g015670
Description : vacuolar sorting receptor (VSR)
Gene families : OG0000585 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000585_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Solyc09g015670.3.1 | |
| Cluster | HCCA: Cluster_132 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00077p00095230 | VSR1;1, BP80,... | Vesicle trafficking.endomembrane trafficking.vacuolar... | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g10040 | VSR2;2, ATVSR3,... | lytic vacuole protein sorting receptor *(VSR) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g03469 | VSR4, VSR2;1,... | lytic vacuole protein sorting receptor *(VSR) & original... | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s0027.g023702 | VSR2;2, ATVSR3,... | lytic vacuole protein sorting receptor *(VSR) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.39G002400.1 | VSR4, VSR2;1,... | lytic vacuole protein sorting receptor *(VSR) & original... | 0.05 | OrthoFinder output from all 47 species | |
| Mp6g18540.1 | VSR2;2, ATVSR3,... | vacuolar sorting receptor (VSR) | 0.03 | OrthoFinder output from all 47 species | |
| Mp7g13540.1 | VSR4, VSR2;1,... | vacuolar sorting receptor (VSR) | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g20943 | VSR4, VSR2;1,... | not classified & original description: none | 0.09 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0010309 | acireductone dioxygenase [iron(II)-requiring] activity | IEP | HCCA |
| MF | GO:0016701 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen | IEP | HCCA |
| MF | GO:0016702 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | IEP | HCCA |
| MF | GO:0051213 | dioxygenase activity | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR003137 | PA_domain | 87 | 159 |
| No external refs found! |