1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc09g015260.1.1

Solyc09g015260.1.1 (NDHB.1, Solyc09g015260)


Aliases : NDHB.1, Solyc09g015260

Description : NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic OS=Coffea arabica (sp|p0cc48|nu2c1_cofar : 181.0)


Gene families : OG0002858 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002858_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc09g015260.1.1
Cluster HCCA: Cluster_158

Target Alias Description ECC score Gene Family Method Actions
ATCG00890 NDHB.1 NADH-Ubiquinone/plastoquinone (complex I) protein 0.01 OrthoFinder output from all 47 species
ATCG01250 NDHB.2 NADH-Ubiquinone/plastoquinone (complex I) protein 0.01 OrthoFinder output from all 47 species
Aev_g13772 NDHB.1 component *(NdhB) of NDH membrane subcomplex M &... 0.02 OrthoFinder output from all 47 species
Ala_g08110 NDHB.1 component *(NdhB) of NDH membrane subcomplex M &... 0.03 OrthoFinder output from all 47 species
Als_g16648 NAD2B, NAD2.2, NAD2 component *(ND2/NQO14) of NADH dehydrogenase proton... 0.05 OrthoFinder output from all 47 species
Ceric.07G060700.1 NDHB.1, Ceric.07G060700 not classified & original description: pacid=50627539... 0.07 OrthoFinder output from all 47 species
Ceric.26G042200.1 NDHB.1, Ceric.26G042200 component *(NdhB) of NDH membrane subcomplex M &... 0.03 OrthoFinder output from all 47 species
Ceric.29G006000.1 NDHB.1, Ceric.29G006000 not classified & original description: pacid=50625919... 0.05 OrthoFinder output from all 47 species
Gb_26773 No alias NADH-ubiquinone oxidoreductase chain 2 OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species
Gb_40560 NDHB.1 NAD(P)H-quinone oxidoreductase subunit 2 B,... 0.07 OrthoFinder output from all 47 species
Lfl_g33049 NDHB.1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_9734021g0010 No alias NADH-ubiquinone oxidoreductase chain 2 OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species
Nbi_g25321 NDHB.1 component *(NdhB) of NDH membrane subcomplex M &... 0.14 OrthoFinder output from all 47 species
Nbi_g25819 NAD2B, NAD2.2, NAD2 component *(ND2/NQO14) of NADH dehydrogenase proton... 0.03 OrthoFinder output from all 47 species
Pir_g56892 NDHB.1 component *(NdhB) of NDH membrane subcomplex M &... 0.02 OrthoFinder output from all 47 species
Solyc01g017170.1.1 NDHB.1, Solyc01g017170 NAD(P)H-quinone oxidoreductase subunit 2 A,... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001750 ND/Mrp_mem 6 119
No external refs found!