Cpa|evm.model.tig00020848.20


Description : 29.2.2.3.5 protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.DExD-box helicases DEA(D/H)-box RNA helicase family protein


Gene families : OG_01_0001498 (Gene family) Phylogenetic Tree(s): OG0001498_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Cpa|evm.model.tig00020848.20
Cluster HCCA cluster: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
AT1G16280 AtRH36, SWA3, RH36 RNA helicase 36 0.04 Gene family
Cre12.g505200 No alias 29.2.2.3.5 protein.synthesis.ribosome... 0.09 Gene family
Cre16.g683500 No alias 29.2.2.3.5 protein.synthesis.ribosome... 0.02 Gene family
LOC_Os03g46610 Os03g0669000 29.2.2.3.5 protein.synthesis.ribosome... 0.02 Gene family
LOC_Os07g43980 Os07g0633500 29.2.2.3.5 protein.synthesis.ribosome... 0.01 Gene family
Solyc10g007550.3.1 Solyc10g007550.3 29.2.2.3.5 protein.synthesis.ribosome... 0.02 Gene family
Zm00001d014787 GRMZM2G075027 29.2.2.3.5 protein.synthesis.ribosome... 0.02 Gene family
Zm00001d022246 GRMZM2G099253 29.2.2.3.5 protein.synthesis.ribosome... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan
MF GO:0005524 ATP binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001650 Helicase_C 236 341
IPR011545 DEAD/DEAH_box_helicase_dom 36 198
No external refs found!