Solyc09g014870.1.1 (Solyc09g014870)

Aliases : Solyc09g014870

Description : copper cation channel (COPT). copper transporter (COPT)

Gene families : OG0001223 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001223_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc09g014870.1.1
Cluster	HCCA: Cluster_67

Target	Alias	Description	ECC score	Gene Family Method
AT3G46900	COPT2	copper transporter 2	0.01	OrthoFinder output from all 47 species
Aev_g22146	COPT5	copper transporter *(COPT) & original description: none	0.02	OrthoFinder output from all 47 species
Als_g46860	COPT5	copper transporter *(COPT) & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene49938.t1	COPT2, Aspi01Gene49938	copper transporter *(COPT) & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.12G003900.1	COPT5, Ceric.12G003900	copper transporter *(COPT) & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.13G061100.1	COPT5, Ceric.13G061100	copper transporter *(COPT) & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.13G063600.1	COPT5, Ceric.13G063600	copper transporter *(COPT) & original description:...	0.04	OrthoFinder output from all 47 species
Ceric.24G040600.1	COPT5, Ceric.24G040600	copper transporter *(COPT) & original description:...	0.03	OrthoFinder output from all 47 species
Dac_g38677	COPT5	copper transporter *(COPT) & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g24804	COPT2	copper transporter *(COPT) & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g34027	COPT1	copper transporter *(COPT) & original description: none	0.04	OrthoFinder output from all 47 species
GSVIVT01024838001	COPT1	Nutrient uptake.copper uptake.reduction-based...	0.02	OrthoFinder output from all 47 species
GSVIVT01024839001	COPT1	Nutrient uptake.copper uptake.reduction-based...	0.01	OrthoFinder output from all 47 species
Gb_22347	No alias	copper cation channel (COPT). copper transporter (COPT)	0.03	OrthoFinder output from all 47 species
LOC_Os01g56420.1	COPT1, LOC_Os01g56420	copper cation channel (COPT). copper transporter (COPT)	0.03	OrthoFinder output from all 47 species
Len_g42407	COPT5	copper transporter *(COPT) & original description: none	0.03	OrthoFinder output from all 47 species
MA_103240g0010	COPT5	copper cation channel (COPT). copper transporter (COPT)	0.02	OrthoFinder output from all 47 species
MA_10434905g0010	No alias	copper cation channel (COPT). copper transporter (COPT)	0.06	OrthoFinder output from all 47 species
Mp4g11240.1	COPT5	copper cation channel (COPT). copper transporter (COPT)	0.02	OrthoFinder output from all 47 species
Msp_g38834	No alias	copper transporter *(COPT) & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g14837	No alias	copper transporter *(COPT) & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0012.g005483	No alias	copper transporter *(COPT) & original description: CDS=1-423	0.05	OrthoFinder output from all 47 species
Sacu_v1.1_s1464.g028041	No alias	copper transporter *(COPT) & original description: CDS=1-423	0.05	OrthoFinder output from all 47 species
Smo123431	COPT5	Nutrient uptake.copper uptake.reduction-based...	0.03	OrthoFinder output from all 47 species
Smo18456	COPT5	Nutrient uptake.copper uptake.reduction-based...	0.02	OrthoFinder output from all 47 species
Solyc02g082080.1.1	COPT5, Solyc02g082080	copper cation channel (COPT). copper transporter (COPT)	0.01	OrthoFinder output from all 47 species
Solyc09g011665.1.1	COPT1, Solyc09g011665	copper cation channel (COPT). copper transporter (COPT)	0.02	OrthoFinder output from all 47 species
Spa_g38847	COPT5	copper transporter *(COPT) & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e008180_P001	COPT1, Zm00001e008180	copper cation channel (COPT). copper transporter (COPT)	0.03	OrthoFinder output from all 47 species
Zm00001e019694_P001	COPT1, Zm00001e019694	copper cation channel (COPT). copper transporter (COPT)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000041	transition metal ion transport	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005375	copper ion transmembrane transporter activity	IEA	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	monoatomic ion transport	None	Extended
BP	GO:0006812	monoatomic cation transport	None	Extended
BP	GO:0006825	copper ion transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008324	monoatomic cation transmembrane transporter activity	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015075	monoatomic ion transmembrane transporter activity	None	Extended
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0022890	inorganic cation transmembrane transporter activity	None	Extended
BP	GO:0030001	metal ion transport	None	Extended
BP	GO:0034220	monoatomic ion transmembrane transport	None	Extended
BP	GO:0035434	copper ion transmembrane transport	IEA	Interproscan
MF	GO:0046873	metal ion transmembrane transporter activity	None	Extended
MF	GO:0046915	transition metal ion transmembrane transporter activity	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	None	Extended
BP	GO:0098655	monoatomic cation transmembrane transport	None	Extended
BP	GO:0098660	inorganic ion transmembrane transport	None	Extended
BP	GO:0098662	inorganic cation transmembrane transport	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0010181	FMN binding	IEP	HCCA
MF	GO:0030246	carbohydrate binding	IEP	HCCA
MF	GO:0030247	polysaccharide binding	IEP	HCCA
MF	GO:0030599	pectinesterase activity	IEP	HCCA
BP	GO:0042545	cell wall modification	IEP	HCCA
BP	GO:0045229	external encapsulating structure organization	IEP	HCCA
MF	GO:0045735	nutrient reservoir activity	IEP	HCCA
MF	GO:0052689	carboxylic ester hydrolase activity	IEP	HCCA
BP	GO:0071554	cell wall organization or biogenesis	IEP	HCCA
BP	GO:0071555	cell wall organization	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR007274	Cop_transporter	86	128
IPR007274	Cop_transporter	30	82

External Links

No external refs found!

Solyc09g014870.1.1 (Solyc09g014870)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation