Solyc09g014480.3.1 (PGIP2, ATPGIP2, Solyc09g014480)


Aliases : PGIP2, ATPGIP2, Solyc09g014480

Description : pathogen polygalacturonase inhibitor (PGIP)


Gene families : OG0002518 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002518_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc09g014480.3.1

Target Alias Description ECC score Gene Family Method Actions
AT3G12145 FLR1, FLOR1 Leucine-rich repeat (LRR) family protein 0.07 OrthoFinder output from all 47 species
AT5G06860 ATPGIP1, PGIP1 polygalacturonase inhibiting protein 1 0.04 OrthoFinder output from all 47 species
AT5G06870 PGIP2, ATPGIP2 polygalacturonase inhibiting protein 2 0.07 OrthoFinder output from all 47 species
Aev_g34575 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01033370001 ATPGIP1, PGIP1 Polygalacturonase inhibitor OS=Vitis vinifera 0.02 OrthoFinder output from all 47 species
Gb_34873 No alias LRR receptor-like serine/threonine-protein kinase GSO1... 0.06 OrthoFinder output from all 47 species
LOC_Os05g01370.1 LOC_Os05g01370 pathogen polygalacturonase inhibitor (PGIP) 0.03 OrthoFinder output from all 47 species
LOC_Os05g01380.1 PGIP2, ATPGIP2,... pathogen polygalacturonase inhibitor (PGIP) 0.05 OrthoFinder output from all 47 species
LOC_Os05g01444.1 ATPGIP1, PGIP1,... pathogen polygalacturonase inhibitor (PGIP) 0.04 OrthoFinder output from all 47 species
MA_10434490g0010 No alias Receptor-like protein Cf-9 homolog OS=Solanum... 0.02 OrthoFinder output from all 47 species
MA_10436129g0010 No alias Receptor-like protein 9DC3 OS=Solanum pimpinellifolium... 0.03 OrthoFinder output from all 47 species
MA_253011g0010 No alias Protein BRASSINOSTEROID INSENSITIVE 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_478919g0010 PSKR2, AtPSKR2 LRR receptor-like serine/threonine-protein kinase FLS2... 0.02 OrthoFinder output from all 47 species
MA_59810g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_9047991g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc07g065090.2.1 ATPGIP1, PGIP1,... pathogen polygalacturonase inhibitor (PGIP) 0.04 OrthoFinder output from all 47 species
Solyc09g014590.3.1 FLR1, FLOR1,... pathogen polygalacturonase inhibitor (PGIP) 0.04 OrthoFinder output from all 47 species
Zm00001e029701_P001 ATPGIP1, PGIP1,... pathogen polygalacturonase inhibitor (PGIP) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004177 aminopeptidase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
InterPro domains Description Start Stop
IPR013210 LRR_N_plant-typ 31 65
IPR001611 Leu-rich_rpt 173 232
IPR001611 Leu-rich_rpt 149 171
No external refs found!