LOC_Os03g52400.1

Description : component mtRPL7/L12 of large ribosomal subunit proteome

Gene families : OG_01_0000950 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000950_tree ,
OG_02_0000673 (LandPlants) Phylogenetic Tree(s): OG_02_0000673_tree ,
OG_03_0000509 (SeedPlants) Phylogenetic Tree(s): OG_03_0000509_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os03g52400.1
Cluster	HCCA: Cluster_353

Target	Alias	Description	ECC score	Gene Family Method
Zm00001e026468_P001	No alias	component mtRPL7/L12 of large ribosomal subunit proteome	0.03	Archaeplastida
Zm00001e032350_P001	No alias	component mtRPL7/L12 of large ribosomal subunit proteome	0.04	Archaeplastida
Zm00001e026468_P001	No alias	component mtRPL7/L12 of large ribosomal subunit proteome	0.03	LandPlants
Zm00001e032350_P001	No alias	component mtRPL7/L12 of large ribosomal subunit proteome	0.04	LandPlants
AMTR_s00062p00098880	evm_27.TU.AmTr_v1...	Protein biosynthesis.organelle translation...	0.02	SeedPlants
Zm00001e026468_P001	No alias	component mtRPL7/L12 of large ribosomal subunit proteome	0.03	SeedPlants
Zm00001e032350_P001	No alias	component mtRPL7/L12 of large ribosomal subunit proteome	0.04	SeedPlants

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular anatomical structure	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR008932	Ribosomal_L7/L12_oligo	42	88
IPR013823	Ribosomal_L7/L12_C	108	174

External Links

No external refs found!

LOC_Os03g52400.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation