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  5. Solyc09g014250.3.1

Solyc09g014250.3.1 (Solyc09g014250)


Aliases : Solyc09g014250

Description : transcription factor (MYB-related)


Gene families : OG0000160 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000160_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc09g014250.3.1
Cluster HCCA: Cluster_63

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00022290 evm_27.TU.AmTr_v1... Transcription factor SRM1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT1G74840 No alias Homeodomain-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G01200 No alias Duplicated homeodomain-like superfamily protein 0.05 OrthoFinder output from all 47 species
AT5G05790 No alias Duplicated homeodomain-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G56840 No alias myb-like transcription factor family protein 0.03 OrthoFinder output from all 47 species
AT5G58900 No alias Homeodomain-like transcriptional regulator 0.02 OrthoFinder output from all 47 species
Adi_g012577 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Adi_g075106 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g10157 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Als_g20732 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Aob_g05025 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene15482.t1 Aspi01Gene15482 MYB-RELATED transcription factor *(MYB-R-R) & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene18200.t1 Aspi01Gene18200 MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0060.g034756 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Cba_g05005 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.02 OrthoFinder output from all 47 species
Cba_g13543 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.04 OrthoFinder output from all 47 species
Cba_g60011 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Dac_g03644 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Dac_g13852 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.04 OrthoFinder output from all 47 species
Dcu_g03859 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g07543 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01007843001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
GSVIVT01013871001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
GSVIVT01016370001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.05 OrthoFinder output from all 47 species
GSVIVT01016996001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 OrthoFinder output from all 47 species
GSVIVT01020132001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.06 OrthoFinder output from all 47 species
GSVIVT01024794001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 OrthoFinder output from all 47 species
LOC_Os01g04930.1 LOC_Os01g04930 transcription factor (MYB-related) 0.03 OrthoFinder output from all 47 species
LOC_Os01g64360.1 LOC_Os01g64360 transcription factor (MYB-related) 0.03 OrthoFinder output from all 47 species
LOC_Os05g37060.1 LOC_Os05g37060 transcription factor (MYB-related) 0.02 OrthoFinder output from all 47 species
LOC_Os05g37730.1 LOC_Os05g37730 transcription factor (MYB-related) 0.02 OrthoFinder output from all 47 species
Len_g15601 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.02 OrthoFinder output from all 47 species
Len_g37411 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.02 OrthoFinder output from all 47 species
Lfl_g35365 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.02 OrthoFinder output from all 47 species
MA_925123g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Pir_g17567 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.04 OrthoFinder output from all 47 species
Pir_g22023 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Pir_g28250 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Solyc03g096350.3.1 Solyc03g096350 transcription factor (MYB-related) 0.03 OrthoFinder output from all 47 species
Solyc03g119740.3.1 Solyc03g119740 transcription factor (MYB-related) 0.02 OrthoFinder output from all 47 species
Solyc04g005100.3.1 Solyc04g005100 transcription factor (MYB-related) 0.04 OrthoFinder output from all 47 species
Spa_g15891 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Spa_g26734 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.02 OrthoFinder output from all 47 species
Spa_g57220 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e019254_P001 Zm00001e019254 transcription factor (MYB-related) 0.03 OrthoFinder output from all 47 species
Zm00001e025784_P001 Zm00001e025784 transcription factor (MYB-related) 0.05 OrthoFinder output from all 47 species
Zm00001e027835_P005 Zm00001e027835 transcription factor (MYB-related) 0.03 OrthoFinder output from all 47 species
Zm00001e031738_P001 Zm00001e031738 transcription factor (MYB-related) 0.03 OrthoFinder output from all 47 species
Zm00001e031755_P001 Zm00001e031755 transcription factor (MYB-related) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 137 181
IPR001005 SANT/Myb 28 74
No external refs found!