- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : OHP, Solyc09g011010
Description : OHP1 LHC-related protein
Gene families : OG0006730 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006730_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Solyc09g011010.3.1 | |
| Cluster | HCCA: Cluster_140 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00012p00252840 | evm_27.TU.AmTr_v1... | Photosynthesis.photophosphorylation.photosystem... | 0.04 | OrthoFinder output from all 47 species | |
| AT5G02120 | OHP | one helix protein | 0.07 | OrthoFinder output from all 47 species | |
| Adi_g015882 | OHP | LHC-related protein *(OHP1) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Als_g54203 | OHP | LHC-related protein *(OHP1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g05451 | OHP | LHC-related protein *(OHP1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g09201 | No alias | LHC-related protein *(OHP1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g48648 | OHP | LHC-related protein *(OHP1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.35G031400.1 | OHP, Ceric.35G031400 | LHC-related protein *(OHP1) & original description:... | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g00111 | OHP | LHC-related protein *(OHP1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g02075 | OHP | LHC-related protein *(OHP1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01034129001 | OHP | Photosynthesis.photophosphorylation.photosystem... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os05g22730.1 | OHP, LOC_Os05g22730 | OHP1 LHC-related protein | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g24229 | No alias | LHC-related protein *(OHP1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g27125 | OHP | LHC-related protein *(OHP1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g60607 | OHP | LHC-related protein *(OHP1) & original description: none | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0009521 | photosystem | IEP | HCCA |
| CC | GO:0009523 | photosystem II | IEP | HCCA |
| BP | GO:0015979 | photosynthesis | IEP | HCCA |
| MF | GO:0016620 | oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | IEP | HCCA |
| MF | GO:0016903 | oxidoreductase activity, acting on the aldehyde or oxo group of donors | IEP | HCCA |
| BP | GO:0055114 | obsolete oxidation-reduction process | IEP | HCCA |
| CC | GO:0098796 | membrane protein complex | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |