LOC_Os03g52170.1

Description : 4-hydroxy-3-methylbut-2-enyl diphosphate reductase

Gene families : OG_01_0003467 (Archaeplastida) Phylogenetic Tree(s): OG_01_0003467_tree ,
OG_02_0005930 (LandPlants) Phylogenetic Tree(s): OG_02_0005930_tree ,
OG_03_0007238 (SeedPlants) Phylogenetic Tree(s): OG_03_0007238_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os03g52170.1
Cluster	HCCA: Cluster_156

Target	Alias	Description	ECC score	Gene Family Method
AT4G34350	CLB6, ISPH, HDR	4-hydroxy-3-methylbut-2-enyl diphosphate reductase	0.13	Archaeplastida
MA_10431651g0010	No alias	4-hydroxy-3-methylbut-2-enyl diphosphate reductase	0.08	Archaeplastida
MA_105092g0010	No alias	4-hydroxy-3-methylbut-2-enyl diphosphate reductase	0.02	Archaeplastida
MA_13946g0010	No alias	4-hydroxy-3-methylbut-2-enyl diphosphate reductase	0.07	Archaeplastida
MA_577712g0010	No alias	no hits & (original description: none)	0.06	Archaeplastida
Mp5g09880.1	No alias	4-hydroxy-3-methylbut-2-enyl diphosphate reductase	0.03	Archaeplastida
Solyc01g109300.3.1	No alias	4-hydroxy-3-methylbut-2-enyl diphosphate reductase	0.02	Archaeplastida
Zm00001e005577_P002	No alias	4-hydroxy-3-methylbut-2-enyl diphosphate reductase	0.04	Archaeplastida
AMTR_s00059p00159100	evm_27.TU.AmTr_v1...	Secondary metabolism.terpenoids.methylerythritol...	0.02	LandPlants
AT4G34350	CLB6, ISPH, HDR	4-hydroxy-3-methylbut-2-enyl diphosphate reductase	0.12	LandPlants
MA_105092g0010	No alias	4-hydroxy-3-methylbut-2-enyl diphosphate reductase	0.02	LandPlants
MA_13946g0010	No alias	4-hydroxy-3-methylbut-2-enyl diphosphate reductase	0.06	LandPlants
Mp5g09880.1	No alias	4-hydroxy-3-methylbut-2-enyl diphosphate reductase	0.03	LandPlants
Solyc01g109300.3.1	No alias	4-hydroxy-3-methylbut-2-enyl diphosphate reductase	0.02	LandPlants
Zm00001e005577_P002	No alias	4-hydroxy-3-methylbut-2-enyl diphosphate reductase	0.03	LandPlants
AMTR_s00059p00159100	evm_27.TU.AmTr_v1...	Secondary metabolism.terpenoids.methylerythritol...	0.02	SeedPlants
AT4G34350	CLB6, ISPH, HDR	4-hydroxy-3-methylbut-2-enyl diphosphate reductase	0.12	SeedPlants
MA_105092g0010	No alias	4-hydroxy-3-methylbut-2-enyl diphosphate reductase	0.02	SeedPlants
MA_13946g0010	No alias	4-hydroxy-3-methylbut-2-enyl diphosphate reductase	0.06	SeedPlants
Solyc01g109300.3.1	No alias	4-hydroxy-3-methylbut-2-enyl diphosphate reductase	0.02	SeedPlants
Zm00001e005577_P002	No alias	4-hydroxy-3-methylbut-2-enyl diphosphate reductase	0.03	SeedPlants

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006081	cellular aldehyde metabolic process	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006090	pyruvate metabolic process	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006644	phospholipid metabolic process	None	Extended
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0008654	phospholipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009240	isopentenyl diphosphate biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016725	oxidoreductase activity, acting on CH or CH2 groups	None	Extended
MF	GO:0016726	oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor	None	Extended
BP	GO:0019288	isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	IEA	Interproscan
BP	GO:0019637	organophosphate metabolic process	None	Extended
BP	GO:0019682	glyceraldehyde-3-phosphate metabolic process	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0032787	monocarboxylic acid metabolic process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0046490	isopentenyl diphosphate metabolic process	None	Extended
MF	GO:0046872	metal ion binding	IEA	Interproscan
BP	GO:0050992	dimethylallyl diphosphate biosynthetic process	IEA	Interproscan
BP	GO:0050993	dimethylallyl diphosphate metabolic process	None	Extended
MF	GO:0051745	4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity	IEA	Interproscan
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090407	organophosphate biosynthetic process	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003451	LytB/IspH	106	447

External Links

No external refs found!

LOC_Os03g52170.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation