Solyc09g008730.3.1 (EMB2001, Solyc09g008730)

Aliases : EMB2001, Solyc09g008730

Description : GTP-binding protein At2g22870 OS=Arabidopsis thaliana (sp|o81004|y2287_arath : 403.0)

Gene families : OG0001817 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001817_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc09g008730.3.1

Target	Alias	Description	ECC score	Gene Family Method
AT2G22870	EMB2001	P-loop containing nucleoside triphosphate hydrolases...	0.04	OrthoFinder output from all 47 species
AT5G11480	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.04	OrthoFinder output from all 47 species
Adi_g025576	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g052096	EMB2001	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g07766	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g08260	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g01272	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene50718.t1	EMB2001, Aspi01Gene50718	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0032.g024622	No alias	not classified & original description: CDS=107-850	0.05	OrthoFinder output from all 47 species
Ceric.32G033500.1	Ceric.32G033500	not classified & original description: pacid=50598717...	0.03	OrthoFinder output from all 47 species
Dac_g12809	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
LOC_Os01g53150.2	LOC_Os01g53150	GTP-binding protein At2g22870 OS=Arabidopsis thaliana...	0.05	OrthoFinder output from all 47 species
Len_g12632	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Msp_g01934	EMB2001	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g00372	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g11675	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Sam_g13424	No alias	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Sam_g23882	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Smo110012	No alias	GTP-binding protein At2g22870 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
Spa_g30624	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g12127	EMB2001	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e038655_P001	EMB2001, Zm00001e038655	GTP-binding protein At2g22870 OS=Arabidopsis thaliana...	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000160	phosphorelay signal transduction system	IEP	HCCA
MF	GO:0000287	magnesium ion binding	IEP	HCCA
MF	GO:0004749	ribose phosphate diphosphokinase activity	IEP	HCCA
BP	GO:0006753	nucleoside phosphate metabolic process	IEP	HCCA
BP	GO:0007165	signal transduction	IEP	HCCA
BP	GO:0009117	nucleotide metabolic process	IEP	HCCA
BP	GO:0009165	nucleotide biosynthetic process	IEP	HCCA
MF	GO:0016778	diphosphotransferase activity	IEP	HCCA
MF	GO:0032977	membrane insertase activity	IEP	HCCA
BP	GO:0035556	intracellular signal transduction	IEP	HCCA
MF	GO:0043169	cation binding	IEP	HCCA
MF	GO:0046872	metal ion binding	IEP	HCCA
BP	GO:0055086	nucleobase-containing small molecule metabolic process	IEP	HCCA
BP	GO:0090407	organophosphate biosynthetic process	IEP	HCCA
MF	GO:0140104	molecular carrier activity	IEP	HCCA
MF	GO:0140597	protein carrier chaperone	IEP	HCCA
BP	GO:1901293	nucleoside phosphate biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR006073	GTP-bd	119	236

External Links

No external refs found!

Solyc09g008730.3.1 (EMB2001, Solyc09g008730)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation