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  5. Solyc09g008630.3.1

Solyc09g008630.3.1 (PSF1, Solyc09g008630)


Aliases : PSF1, Solyc09g008630

Description : component PSF1 of GINS DNA replication fork maintenance complex


Gene families : OG0007268 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007268_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc09g008630.3.1

Target Alias Description ECC score Gene Family Method Actions
Aop_g09325 PSF1 component *(PSF1) of GINS DNA replication fork... 0.05 OrthoFinder output from all 47 species
Ceric.21G033600.1 PSF1, Ceric.21G033600 component *(PSF1) of GINS DNA replication fork... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021234.25 PSF1 Cell cycle.interphase.DNA replication.initiation.GINS... 0.03 OrthoFinder output from all 47 species
Cre03.g161050 No alias Cell cycle.interphase.DNA replication.initiation.GINS... 0.11 OrthoFinder output from all 47 species
Dac_g07869 PSF1 component *(PSF1) of GINS DNA replication fork... 0.06 OrthoFinder output from all 47 species
GSVIVT01017274001 PSF1 Cell cycle.interphase.DNA replication.initiation.GINS... 0.03 OrthoFinder output from all 47 species
LOC_Os05g37980.1 PSF1, LOC_Os05g37980 component PSF1 of GINS DNA replication fork maintenance complex 0.03 OrthoFinder output from all 47 species
Mp8g09750.1 PSF1 component PSF1 of GINS DNA replication fork maintenance complex 0.01 OrthoFinder output from all 47 species
Msp_g07533 PSF1 component *(PSF1) of GINS DNA replication fork... 0.02 OrthoFinder output from all 47 species
Tin_g45701 PSF1 component *(PSF1) of GINS DNA replication fork... 0.05 OrthoFinder output from all 47 species
Zm00001e006506_P003 PSF1, Zm00001e006506 component PSF1 of GINS DNA replication fork maintenance complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000808 origin recognition complex IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005664 nuclear origin of replication recognition complex IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0007059 chromosome segregation IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051301 cell division IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR021151 GINS_A 82 150
No external refs found!