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  5. Solyc09g008390.3.1

Solyc09g008390.3.1 (AtMYB27, MYB27, Solyc09g008390)


Aliases : AtMYB27, MYB27, Solyc09g008390

Description : transcription factor (MYB)


Gene families : OG0000015 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc09g008390.3.1
Cluster HCCA: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene70543.t1 ATMYB101,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01029145001 MYB36, AtMYB36 RNA biosynthesis.transcriptional activation.MYB... 0.01 OrthoFinder output from all 47 species
Gb_26833 ATMYB61, MYB61 transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Len_g03375 MYB86, ATMYB86 MYB class-R2R3 subgroup-13 transcription factor &... 0.02 OrthoFinder output from all 47 species
MA_23242g0010 MYB3, ATMYB3 transcription factor (MYB) 0.01 OrthoFinder output from all 47 species
Pir_g16020 ATMYB61, MYB61 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g23393 ATMYB48-1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c3_9330V3.1 DUO1, Pp3c3_9330 myb-like HTH transcriptional regulator family protein 0.01 OrthoFinder output from all 47 species
Pp3c8_16720V3.1 DUO1, Pp3c8_16720 myb-like HTH transcriptional regulator family protein 0.02 OrthoFinder output from all 47 species
Sam_g37504 No alias transcriptional regulator *(MS188) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
MF GO:0008276 protein methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
MF GO:0016278 lysine N-methyltransferase activity IEP HCCA
MF GO:0016279 protein-lysine N-methyltransferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0018024 histone lysine N-methyltransferase activity IEP HCCA
MF GO:0042054 histone methyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 17 64
IPR001005 SANT/Myb 74 115
No external refs found!