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Aliases : Solyc09g008380
Description : pectate lyase
Gene families : OG0000492 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000492_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00004p00123190 | evm_27.TU.AmTr_v1... | Cell wall.pectin.modification and degradation.pectate lyase | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00039p00189000 | evm_27.TU.AmTr_v1... | Cell wall.pectin.modification and degradation.pectate lyase | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00120p00111300 | evm_27.TU.AmTr_v1... | Cell wall.pectin.modification and degradation.pectate lyase | 0.08 | OrthoFinder output from all 47 species | |
| AT3G07010 | No alias | Pectin lyase-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT3G53190 | No alias | Pectin lyase-like superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| AT5G48900 | No alias | Pectin lyase-like superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g013762 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g19777 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0033.g025097 | No alias | EC_4.2 carbon-oxygen lyase & original description: CDS=1-1140 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0054.g033628 | RHS14 | EC_4.2 carbon-oxygen lyase & original description: CDS=168-1388 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0084.g039058 | No alias | EC_4.2 carbon-oxygen lyase & original description: CDS=1-1698 | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.1Z152600.1 | Ceric.1Z152600 | EC_4.2 carbon-oxygen lyase & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.22G068000.1 | Ceric.22G068000 | EC_4.2 carbon-oxygen lyase & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.34G020600.1 | Ceric.34G020600 | EC_4.2 carbon-oxygen lyase & original description:... | 0.05 | OrthoFinder output from all 47 species | |
| Dac_g11741 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g43847 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01003984001 | No alias | Cell wall.pectin.modification and degradation.pectate lyase | 0.04 | OrthoFinder output from all 47 species | |
| Gb_02248 | No alias | pectate lyase | 0.05 | OrthoFinder output from all 47 species | |
| Gb_19802 | No alias | pectate lyase | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os06g38510.2 | LOC_Os06g38510 | pectate lyase | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os10g31910.1 | LOC_Os10g31910 | pectate lyase | 0.03 | OrthoFinder output from all 47 species | |
| Len_g10584 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| MA_10205415g0010 | No alias | pectate lyase | 0.03 | OrthoFinder output from all 47 species | |
| MA_10437227g0010 | No alias | pectate lyase | 0.03 | OrthoFinder output from all 47 species | |
| MA_91467g0010 | No alias | pectate lyase | 0.03 | OrthoFinder output from all 47 species | |
| Mp3g01000.1 | No alias | pectate lyase | 0.06 | OrthoFinder output from all 47 species | |
| Mp8g10190.1 | No alias | pectate lyase | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g01001 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g43436 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pp3c17_16370V3.1 | Pp3c17_16370 | Pectin lyase-like superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0018.g007508 | No alias | EC_4.2 carbon-oxygen lyase & original description: CDS=125-1285 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0093.g019058 | No alias | EC_4.2 carbon-oxygen lyase & original description: CDS=1-1206 | 0.03 | OrthoFinder output from all 47 species | |
| Solyc06g071840.3.1 | Solyc06g071840 | Probable pectate lyase 22 OS=Arabidopsis thaliana... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc09g061890.3.1 | Solyc09g061890 | pectate lyase | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e004654_P002 | Zm00001e004654 | pectate lyase | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e008755_P002 | Zm00001e008755 | pectate lyase | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e029999_P001 | Zm00001e029999 | pectate lyase | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e040624_P001 | Zm00001e040624 | pectate lyase | 0.06 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008289 | lipid binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002022 | Pec_lyase | 155 | 336 |
| No external refs found! |