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  5. Solyc09g007330.4.1

Solyc09g007330.4.1 (MCM8, Solyc09g007330)


Aliases : MCM8, Solyc09g007330

Description : component MCM8 of MCM8-9 cell cycle auxiliary complex


Gene families : OG0008313 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008313_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc09g007330.4.1
Cluster HCCA: Cluster_151

Target Alias Description ECC score Gene Family Method Actions
Aop_g12315 MCM8 component *(MCM8) of MCM8-9 cell cycle auxiliary complex... 0.03 OrthoFinder output from all 47 species
Cre16.g665950 MCM8 Cell cycle.interphase.DNA replication.initiation.MCM8-9... 0.05 OrthoFinder output from all 47 species
GSVIVT01025535001 MCM8 Cell cycle.interphase.DNA replication.initiation.MCM8-9... 0.02 OrthoFinder output from all 47 species
MA_10312461g0010 MCM8 component MCM8 of MCM8-9 cell cycle auxiliary complex 0.03 OrthoFinder output from all 47 species
Mp3g08270.1 MCM8 component MCM8 of MCM8-9 cell cycle auxiliary complex 0.03 OrthoFinder output from all 47 species
Spa_g11916 MCM8 component *(MCM8) of MCM8-9 cell cycle auxiliary complex... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006270 DNA replication initiation IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000796 condensin complex IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0004146 dihydrofolate reductase activity IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006575 cellular modified amino acid metabolic process IEP HCCA
BP GO:0006760 folic acid-containing compound metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
BP GO:0007076 mitotic chromosome condensation IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0009396 folic acid-containing compound biosynthetic process IEP HCCA
MF GO:0015035 protein-disulfide reductase activity IEP HCCA
MF GO:0015036 disulfide oxidoreductase activity IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP HCCA
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0030261 chromosome condensation IEP HCCA
BP GO:0042398 cellular modified amino acid biosynthetic process IEP HCCA
BP GO:0042558 pteridine-containing compound metabolic process IEP HCCA
BP GO:0042559 pteridine-containing compound biosynthetic process IEP HCCA
BP GO:0046653 tetrahydrofolate metabolic process IEP HCCA
BP GO:0046654 tetrahydrofolate biosynthetic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
BP GO:1903047 mitotic cell cycle process IEP HCCA
InterPro domains Description Start Stop
IPR033762 MCM_OB 140 269
IPR041562 MCM_lid 609 696
IPR001208 MCM_dom 342 556
No external refs found!