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  5. Solyc09g005310.3.1

Solyc09g005310.3.1 (Solyc09g005310)


Aliases : Solyc09g005310

Description : LIMR family protein At5g01460 OS=Arabidopsis thaliana (sp|q9m028|lmbd2_arath : 751.0)


Gene families : OG0004233 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004233_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc09g005310.3.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00244850 evm_27.TU.AmTr_v1... LIMR family protein At3g08930 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT3G08930 No alias LMBR1-like membrane protein 0.04 OrthoFinder output from all 47 species
AT5G01460 No alias LMBR1-like membrane protein 0.03 OrthoFinder output from all 47 species
Als_g38689 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g02814 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os06g03760.1 LOC_Os06g03760 LIMR family protein Os06g0128200 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
Ore_g04456 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c23_4110V3.1 Pp3c23_4110 LMBR1-like membrane protein 0.02 OrthoFinder output from all 47 species
Ppi_g15699 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e036634_P001 Zm00001e036634 LIMR family protein Os06g0128200 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004197 cysteine-type endopeptidase activity IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0005096 GTPase activator activity IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
BP GO:0016485 protein processing IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
BP GO:0032012 regulation of ARF protein signal transduction IEP HCCA
BP GO:0046578 regulation of Ras protein signal transduction IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071586 CAAX-box protein processing IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
BP GO:1902531 regulation of intracellular signal transduction IEP HCCA
InterPro domains Description Start Stop
IPR006876 LMBR1-like_membr_prot 9 275
IPR006876 LMBR1-like_membr_prot 262 487
No external refs found!